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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Manes.16G080400.1.p |
| Organism |
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| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
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| Family |
GATA |
| Protein Properties |
Length: 306aa MW: 33804.3 Da PI: 9.3309 |
| Description |
GATA family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Manes.16G080400.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GATA | 59.9 | 3.4e-19 | 175 | 208 | 1 | 34 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34
C+ C+tt+TplWR+gp+g+k+LCnaCG+++rk +
Manes.16G080400.1.p 175 CADCNTTSTPLWRSGPQGPKSLCNACGIRQRKAR 208
*******************************987 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0008270 | Molecular Function | zinc ion binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 306 aa
Download sequence Send
to blast |
MTPFYLNPPT SSPFPVVEIR EDQQHLQLFL SPHQAAASLS SAPAFFDTTG HDQDQRGAQL 60
GGSRQHHQED DKYILQSRWS DDHHKPLSSS SFQAPAISES NSNEVQKFFS CKREDGDYEG 120
SVGEGSAAKW MPSKMRLMHK MMNSSSNFSA TDEPVKFTVK FQDQQCHTNN NIRVCADCNT 180
TSTPLWRSGP QGPKSLCNAC GIRQRKARRA MAAAAAMANG TVVAMETSPM KTKMHNKEKK 240
LRTGHIAQGK KLRKPLDLAQ GQKKLCSFKN LAISLSKNSA LQRVFPQDVE EAAILLMELS 300
CGFIS*
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