 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Manes.16G074900.1.p |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
|
| Family |
GATA |
| Protein Properties |
Length: 370aa MW: 40216.3 Da PI: 6.4405 |
| Description |
GATA family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Manes.16G074900.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GATA | 55.1 | 1.1e-17 | 260 | 294 | 1 | 35 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35
C +C t kTp+WR gp g+ktLCnaCG++y++ +l
Manes.16G074900.1.p 260 CLHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRL 294
99*****************************9885 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0007623 | Biological Process | circadian rhythm |
| GO:0009416 | Biological Process | response to light stimulus |
| GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0008270 | Molecular Function | zinc ion binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 370 aa
Download sequence Send
to blast |
MEAPEFYTQS GICSQFANEK HHSLDSKPSG GGGGGDHFIV EDLLDFSNED AVITDGSAFD 60
TVTGNSTDSS TVTVVDSCNS SSFSGCEPCF KGDIGSRNFA DVQFSSDLCV PYDDLAELEW 120
LSNFVEESFS SEDLQKLQLI SGMKARPDES SETRNFQPAD CNGVNTNNSN NAAAPNNNNP 180
IFHPEVSVPA KARSKRSRAA PCNWASRLLV LSPTTSSSDP EIVASPANHP NSGKKTVKAP 240
GTKRREGADG GTGNGDGRKC LHCATDKTPQ WRTGPMGPKT LCNACGVRYK SGRLVPEYRP 300
AASPTFVLTK HSNSHRKVLE LRRQKELLRA QQQQQQQFLH HHQNMVFDVS NGDDYLIHQH 360
VGPDFRQLI*
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| Functional Description ? help
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| Source |
Description |
| UniProt | Transcriptional activator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters. May be involved in the regulation of some light-responsive genes (By similarity). Transcription activator involved in xylem formation. Functions upstream of NAC030/VND7, a master switch of xylem vessel differentiation (PubMed:25265867). {ECO:0000250|UniProtKB:Q8LAU9, ECO:0000269|PubMed:25265867}. |
