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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Manes.16G053700.1.p |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
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| Family |
Trihelix |
| Protein Properties |
Length: 328aa MW: 36471.1 Da PI: 10.3005 |
| Description |
Trihelix family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Manes.16G053700.1.p | genome | JGI | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | trihelix | 59.5 | 8.2e-19 | 18 | 96 | 2 | 73 |
trihelix 2 WtkqevlaLiearremeerlrrgk.......lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrts 73
Wt +e+++Liea+r ++er +++ ++ +W++v +++r++g+ rs++qC++kw+nl ++ykk+++ e++ ++
Manes.16G053700.1.p 18 WTLSETMVLIEAKRMDDERRMKSSdsegrskPAELRWKWVEDYCRRKGCLRSQNQCNDKWDNLMRDYKKVRDYERRIAE 96
**************77777775422333333999***************************************998754 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 328 aa
Download sequence Send
to blast |
MADQGGNIVI RDYRKGNWTL SETMVLIEAK RMDDERRMKS SDSEGRSKPA ELRWKWVEDY 60
CRRKGCLRSQ NQCNDKWDNL MRDYKKVRDY ERRIAERGVG NEASSSSYWK LEKIERKEEN 120
LPSNMLIQVY EALVEVVERR GTQKVVITAG GSASNPRPIT TVRPPLSPLL QRQISVPIPV 180
LAPPPRPLPP ALQAQPSPPL PYSQTPLPAV DSDTSEHSNS PAKRRRRRGG GGGGASSGGS 240
ASGSTSHEVG TAISKSASSI AEAIQACEER KERRHRDLLS LHERRLKIEE SRTELNRQGI 300
NGLVDSINNL ANSILALASH KHQSTPK*
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