PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.16G043500.2.p
Organism
Manihot esculenta
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family BES1
Protein Properties Length: 258aa    MW: 27017.8 Da    PI: 6.1399
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.16G043500.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF82236.12.3e-1127572149
               DUF822  72 gskpleeaeaagssasaspesslqsslkssalaspvesysaspksssfpspssldsislasa....asllpvlsvlslvsss 149
                          g+kp e+++++g sasasp+ss++        +sp++sy++sp sssfpsp+s+  + +++     +sl+p+l++ls+vs s
  Manes.16G043500.2.p   2 GCKPVERMDIIGGSASASPCSSYH--------PSPCASYNPSPGSSSFPSPVSSRYTANTNGnadaNSLIPWLKNLSSVSVS 75 
                          89**********************........*******************998877666556788**********997655 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056878.2E-13270IPR008540BES1/BZR1 plant transcription factor, N-terminal
Sequence ? help Back to Top
Protein Sequence    Length: 258 aa     Download sequence    Send to blast
MGCKPVERMD IIGGSASASP CSSYHPSPCA SYNPSPGSSS FPSPVSSRYT ANTNGNADAN  60
SLIPWLKNLS SVSVSSKHPH HLFIHSGSIS APVTPPLSSP TARTPRTKND WDDPAGGPSW  120
AGQNYPFPSS MPSSTPPSPG RQVIPDSGWL AGIEIPQSGP SSPTFSLVSR NPFGFRDEPL  180
SGTGSRMWTP GQSGTCSPAV PAGADQTADV PMPDSMAAEF AFGNHTTWLV KAWEGERIHE  240
ECVPDDLELT LGNSKTR*
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.16G043500.2.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021596143.10.0BES1/BZR1 homolog protein 4-like isoform X1
RefseqXP_021596144.10.0BES1/BZR1 homolog protein 4-like isoform X2
SwissprotQ9ZV887e-98BEH4_ARATH; BES1/BZR1 homolog protein 4
TrEMBLA0A2C9U8G20.0A0A2C9U8G2_MANES; Uncharacterized protein
TrEMBLA0A2C9U9N00.0A0A2C9U9N0_MANES; Uncharacterized protein
STRINGcassava4.1_011709m0.0(Manihot esculenta)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78700.12e-82BES1/BZR1 homolog 4