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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Manes.16G040100.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
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Family |
Trihelix |
Protein Properties |
Length: 318aa MW: 36565.1 Da PI: 6.6495 |
Description |
Trihelix family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Manes.16G040100.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | trihelix | 48.9 | 1.8e-15 | 25 | 116 | 1 | 87 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdql 85
+W+++ + +L+e+ ++ +l+rg+l++++W+ev++++ + ++ +r+ +qCk++++ ++k+yk +k++ + + +s++p++++l
Manes.16G040100.1.p 25 CWSEEATSTLVEVWGKRYLELNRGNLRQKDWQEVADAVnakhgHTKKTHRTDVQCKNRIDTIKKKYKIEKARVTSSNGMLTSSWPFYESL 114
7**************************************999999999*************************999888889*******9 PP
trihelix 86 ea 87
+a
Manes.16G040100.1.p 115 DA 116
85 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 318 aa
Download sequence Send
to blast |
MGDLIDSVTP STTPHSRPLP IREDCWSEEA TSTLVEVWGK RYLELNRGNL RQKDWQEVAD 60 AVNAKHGHTK KTHRTDVQCK NRIDTIKKKY KIEKARVTSS NGMLTSSWPF YESLDALIGS 120 NFSSKKQASP SLSPSPPVAL PMTSYRRTPS STPPTAVVAL PQKRPLDDGY FRRNYSAMAA 180 AAAAAAESES EEEEEEEEEE GERERERERE SEEDEEGEGI RRLARAIERF GEVYERVESE 240 KLRQMLDLEK QRMKFAKDLE MERMRIFTET QIQLEKIKKG KRSGSNDFLN MVFPHFNKMQ 300 FIQPVDKHLS YHLLPRP*
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Best hit in Arabidopsis thaliana ? help
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Hit ID |
E-value |
Description |
AT3G58630.1 | 1e-43 | sequence-specific DNA binding transcription factors |