PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Function |

Cis-element |

Regulation |

Orthologous Group |

Publication

Basic Information? help Back to Top

TF ID

Manes.16G033500.1.p

Organism

Manihot esculenta

Taxonomic ID

3983

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot

Family

VOZ

Protein Properties

Length: 482aa MW: 53098.7 Da PI: 5.5074

Description

VOZ family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Manes.16G033500.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	VOZ	428.2	1.2e-131	208	424	2	217
VOZ 2 ppsaflgpkcalwdctrpaqg.sewlqdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspw 90 ppsaflgpkcalwdc+rpaqg + +q+ycssfh +lalneg+pgt pvlrp+gi+lkdgllfaalsak+qgk+vgipecegaatakspw Manes.16G033500.1.p 208 PPSAFLGPKCALWDCPRPAQGgLDLCQNYCSSFHHALALNEGPPGTGPVLRPGGIGLKDGLLFAALSAKAQGKDVGIPECEGAATAKSPW 297 7****************96389************************************************************** PP VOZ 91 naaelfdlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldal 180 na+elfdls+legetirew+ffdkprrafesgnrkqrslpdysgrgwhesrkqvm+efgglkrsyymdpqp+++fewhlyeyein++da+ Manes.16G033500.1.p 298 NAPELFDLSVLEGETIREWIFFDKPRRAFESGNRKQRSLPDYSGRGWHESRKQVMNEFGGLKRSYYMDPQPLNTFEWHLYEYEINKCDAC 387 ************************************************************************************** PP VOZ 181 alyrlelklvdekksakgkvskdsladlqkklgrlta 217 alyrlelk vd+kk akgk++++s++dlqk+++rlta Manes.16G033500.1.p 388 ALYRLELKAVDGKKCAKGKITTESVVDLQKQMVRLTA 424 *********************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 482 aa Download sequence Send to blast
MGKGSKINCK SASHKLFKDK AKNRVDDLQG MFMDLQFARK ESRTVDVAVL EEQVHQMLRE 60 WKAELNEPSP ASSLQQGGTL GSFSSDIYRL LQLCEEQDDA TSALAAPKPE PNDQSLQIRD 120 IVVFQEGYGV NQGQQGCNFP FVDQGKNPSS GVHGMMASTI EGAGQLDYHQ YDLSQNLELN 180 FYAGHNSTDL CVEDGVPHIS GYLSSICPPS AFLGPKCALW DCPRPAQGGL DLCQNYCSSF 240 HHALALNEGP PGTGPVLRPG GIGLKDGLLF AALSAKAQGK DVGIPECEGA ATAKSPWNAP 300 ELFDLSVLEG ETIREWIFFD KPRRAFESGN RKQRSLPDYS GRGWHESRKQ VMNEFGGLKR 360 SYYMDPQPLN TFEWHLYEYE INKCDACALY RLELKAVDGK KCAKGKITTE SVVDLQKQMV 420 RLTAEFPTDN KRCVKGRTKV NAKVSVGSVY AAPDGGAPTN ETFDYEPCNY LVENLGDYYV 480 N*

Sequence ? help Back to Top

Protein Sequence Length: 482 aa Download sequence Send to blast

MGKGSKINCK SASHKLFKDK AKNRVDDLQG MFMDLQFARK ESRTVDVAVL EEQVHQMLRE  60
WKAELNEPSP ASSLQQGGTL GSFSSDIYRL LQLCEEQDDA TSALAAPKPE PNDQSLQIRD  120
IVVFQEGYGV NQGQQGCNFP FVDQGKNPSS GVHGMMASTI EGAGQLDYHQ YDLSQNLELN  180
FYAGHNSTDL CVEDGVPHIS GYLSSICPPS AFLGPKCALW DCPRPAQGGL DLCQNYCSSF  240
HHALALNEGP PGTGPVLRPG GIGLKDGLLF AALSAKAQGK DVGIPECEGA ATAKSPWNAP  300
ELFDLSVLEG ETIREWIFFD KPRRAFESGN RKQRSLPDYS GRGWHESRKQ VMNEFGGLKR  360
SYYMDPQPLN TFEWHLYEYE INKCDACALY RLELKAVDGK KCAKGKITTE SVVDLQKQMV  420
RLTAEFPTDN KRCVKGRTKV NAKVSVGSVY AAPDGGAPTN ETFDYEPCNY LVENLGDYYV  480
N*

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269\|PubMed:15295067, ECO:0000269\|PubMed:22904146}.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Manes.16G033500.1.p

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: By far-red light. {ECO:0000269\|PubMed:22904146}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_021597291.1	0.0	transcription factor VOZ1-like isoform X1
Swissprot	Q9SGQ0	0.0	VOZ1_ARATH; Transcription factor VOZ1
TrEMBL	A0A2C9U8K0	0.0	A0A2C9U8K0_MANES; Uncharacterized protein
STRING	cassava4.1_006612m	0.0	(Manihot esculenta)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF1498	34	94

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28520.2	0.0	vascular plant one zinc finger protein

Link Out ? help Back to Top
Phytozome	Manes.16G033500.1.p

Publications ? help Back to Top
Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] Yasui Y,Kohchi T VASCULAR PLANT ONE-ZINC FINGER1 and VOZ2 repress the FLOWERING LOCUS C clade members to control flowering time in Arabidopsis. Biosci. Biotechnol. Biochem., 2014. 78(11): p. 1850-5 [PMID:25351333] Kumar S,Choudhary P,Gupta M,Nath U VASCULAR PLANT ONE-ZINC FINGER1 (VOZ1) and VOZ2 Interact with CONSTANS and Promote Photoperiodic Flowering Transition. Plant Physiol., 2018. 176(4): p. 2917-2930 [PMID:29507119] Song C,Lee J,Kim T,Hong JC,Lim CO VOZ1, a transcriptional repressor of DREB2C, mediates heat stress responses in Arabidopsis. Planta, 2018. 247(6): p. 1439-1448 [PMID:29536220]