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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Manes.15G190300.2.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
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Family | BES1 | ||||||||
Protein Properties | Length: 251aa MW: 27736.6 Da PI: 4.8271 | ||||||||
Description | BES1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF822 | 101 | 2.4e-31 | 1 | 117 | 29 | 140 |
DUF822 29 iyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspesslqsslkssalaspv.esysaspkss 117 ++aGLR++Gn++lp+raD+n+Vl+AL+reAGw+ve+DGttyr++ p ++++ + sp ss slk++a+++ + + + ++ + + Manes.15G190300.2.p 1 MLAGLRQYGNFPLPARADMNDVLAALAREAGWTVEADGTTYRQSPPPS-QMASFTVRSVESPVSS--ASLKNCAVKAAAlDCQPSVVRID 87 79****************************************876666.5555444445555555..56999998766515666778899 PP DUF822 118 sfpspssldsislasa.......asllpvl 140 +++sp slds+ +++ a+ +p+ Manes.15G190300.2.p 88 ESLSPPSLDSVVMTERetrsekfANASPIN 117 ***********9998854444444444444 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF05687 | 1.3E-33 | 1 | 122 | IPR008540 | BES1/BZR1 plant transcription factor, N-terminal |
SuperFamily | SSF51445 | 7.9E-22 | 140 | 225 | IPR017853 | Glycoside hydrolase superfamily |
Gene3D | G3DSA:3.20.20.80 | 8.7E-24 | 143 | 225 | IPR013781 | Glycoside hydrolase, catalytic domain |
Pfam | PF01373 | 1.9E-8 | 167 | 224 | IPR001554 | Glycoside hydrolase, family 14 |
PRINTS | PR00750 | 1.4E-6 | 180 | 194 | IPR001554 | Glycoside hydrolase, family 14 |
PRINTS | PR00750 | 1.4E-6 | 201 | 219 | IPR001554 | Glycoside hydrolase, family 14 |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0000272 | Biological Process | polysaccharide catabolic process | ||||
GO:0016161 | Molecular Function | beta-amylase activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 251 aa Download sequence Send to blast |
MLAGLRQYGN FPLPARADMN DVLAALAREA GWTVEADGTT YRQSPPPSQM ASFTVRSVES 60 PVSSASLKNC AVKAAALDCQ PSVVRIDESL SPPSLDSVVM TERETRSEKF ANASPINSVD 120 CLDADQLIQD VRSGEHDDDF AGTSYVPVYA FLATGFINNF CQLVDPEGVR QELSQMKSLD 180 IDGIVVECWW GIVEAWSPQK YVWSGYRELF NIIREFKLKL QMQIGLDSLM KKGQLVVIAH 240 SHLVTWRSKK * |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1btc_A | 8e-16 | 144 | 221 | 6 | 83 | BETA-AMYLASE |
1bya_A | 8e-16 | 144 | 221 | 10 | 87 | BETA-AMYLASE |
1byb_A | 8e-16 | 144 | 221 | 10 | 87 | BETA-AMYLASE |
1byc_A | 8e-16 | 144 | 221 | 10 | 87 | BETA-AMYLASE |
1byd_A | 8e-16 | 144 | 221 | 10 | 87 | BETA-AMYLASE |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Manes.15G190300.2.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_021594906.1 | 1e-158 | beta-amylase 8 isoform X2 | ||||
Swissprot | Q9FH80 | 1e-101 | BAM8_ARATH; Beta-amylase 8 | ||||
TrEMBL | A0A2C9UH38 | 0.0 | A0A2C9UH38_MANES; Beta-amylase | ||||
STRING | cassava4.1_023043m | 1e-164 | (Manihot esculenta) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G45300.1 | 1e-104 | beta-amylase 2 |
Link Out ? help Back to Top | |
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Phytozome | Manes.15G190300.2.p |
Publications ? help Back to Top | |||
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