PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.15G140900.1.p
Organism
Manihot esculenta
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family G2-like
Protein Properties Length: 301aa    MW: 33697.8 Da    PI: 7.9901
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.15G140900.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like105.53.1e-331972255
              G2-like  2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
                         prlrWtpeLH++Fv+a+e+LGG++kAtPk +l+lm+vkgLt++hvkSHLQ+YR+
  Manes.15G140900.1.p 19 PRLRWTPELHHCFVHAIERLGGQDKATPKLVLQLMDVKGLTISHVKSHLQMYRS 72
                         8****************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129412.471575IPR017930Myb domain
Gene3DG3DSA:1.10.10.602.2E-321576IPR009057Homeodomain-like
SuperFamilySSF466893.76E-161774IPR009057Homeodomain-like
TIGRFAMsTIGR015576.9E-241972IPR006447Myb domain, plants
PfamPF002498.0E-92071IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 301 aa     Download sequence    Send to blast
MGSCGRSGTV RQYIRSKVPR LRWTPELHHC FVHAIERLGG QDKATPKLVL QLMDVKGLTI  60
SHVKSHLQMY RSMRSDLGKQ DKSSTHQRRQ SFEDHDGCVD EIKPIEESDS HFIYSTIPSK  120
RARIETRSSI SDQNLQCSQG ICETVTNPYS LDDYMRMKEG NGGGFRWEQT HSKPEPTAFS  180
LPHDLCSLNT FNYAVEESDF LKIAKQEQGK CKLESHIWKP EATRSRRRRR EDEEEGRGGS  240
GSGCCELSLS LSLPCPSSCT SEMSEAFSSY VSRSIFKDCS GSASGKRSVN LDLSIALCGT  300
*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4r_A5e-192074357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B5e-192074357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C5e-192074357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D5e-192074357Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.15G140900.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021593546.10.0putative Myb family transcription factor At1g14600
TrEMBLA0A2C9UG370.0A0A2C9UG37_MANES; Uncharacterized protein
STRINGcassava4.1_029048m0.0(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF55393353
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14600.15e-35G2-like family protein