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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Manes.15G133200.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
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Family |
C2H2 |
Protein Properties |
Length: 473aa MW: 51710.5 Da PI: 6.0912 |
Description |
C2H2 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Manes.15G133200.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-C2H2 | 14.5 | 0.00011 | 126 | 148 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23
y+Cp+Cg+s+++ ++ H ++
Manes.15G133200.1.p 126 YECPICGQSYKSEEEVSMHVESC 148
99***************998776 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 473 aa
Download sequence Send
to blast |
MDDMKDKFKG FMKKVNTQLS SSSSGKFKGQ GRVLGGSSSA SSGSNNPIGS RYYQPDNPKP 60 TPTPSSLNSS SNFKSLPQKT PNSDQNKPAP INNSIPNRKP VDGFDPFDSL ITTGKRSQNG 120 SSLNVYECPI CGQSYKSEEE VSMHVESCAN NNNNDLVDEG NGIGASSGSE LQSSVGAYLS 180 GKPPEGSVEV VLRLFRNIVK EPGNAKFRKI RMGNPKIREA VSDVAGGVEL LEGVGFELKE 240 EGGEMCAVME VPNEERLRLI NEAIRLLEPT KVEGQVQKIE EKPSVAPSGT GEPVEPKKID 300 REIRVFFSVP ESVAAKIQLP DSFYNLSAEE LKREADARKK KIAESQLLIP KSYKEKQAKA 360 ARKRYRRTLI RIQFPDGVVL QGVFAPWEPT SALYEFVSAS LKDPSLEFEL LDPVLVKRRV 420 IPHFPGAGER GSTLEDEELV PSALIKFRPV ETDSCVFTGL CNELLEISEP LN*
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Functional Description ? help
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Source |
Description |
UniProt | Facilitates the interaction of SYP31 and CDC48A, thereby regulating an CDC48A membrane-associated function (Ref.8). Appears to act as a negative regulator mediating the powdery mildew-plant interaction (PubMed:19176722, PubMed:23301616). {ECO:0000269|PubMed:19176722, ECO:0000269|PubMed:23301616, ECO:0000269|Ref.8}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Induced in response to powdery mildew and by benzothiadiazole (BTH) treatment. {ECO:0000269|PubMed:19176722}. |
Publications
? help Back to Top |
- Suzuki T,Park H,Till EA,Lennarz WJ
The PUB domain: a putative protein-protein interaction domain implicated in the ubiquitin-proteasome pathway. Biochem. Biophys. Res. Commun., 2001. 287(5): p. 1083-7 [PMID:11587532] - Rancour DM,Park S,Knight SD,Bednarek SY
Plant UBX domain-containing protein 1, PUX1, regulates the oligomeric structure and activity of arabidopsis CDC48. J. Biol. Chem., 2004. 279(52): p. 54264-74 [PMID:15498773] - Chandran D,Rickert J,Cherk C,Dotson BR,Wildermuth MC
Host cell ploidy underlying the fungal feeding site is a determinant of powdery mildew growth and reproduction. Mol. Plant Microbe Interact., 2013. 26(5): p. 537-45 [PMID:23301616]
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