PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Manes.15G066800.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
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Family | ERF | ||||||||
Protein Properties | Length: 237aa MW: 25840.9 Da PI: 8.9194 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 63.1 | 5.9e-20 | 34 | 84 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++y+GVr ++ +gr++AeIrdp + ++r++lg++++ae+Aa+a++aa++ ++g Manes.15G066800.1.p 34 PKYRGVRKRP-WGRYAAEIRDPLK---KTRVWLGTYDSAEDAARAYDAAARTFRG 84 79********.**********743...5***********************9998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00018 | 3.70E-19 | 34 | 93 | No hit | No description |
Pfam | PF00847 | 2.4E-13 | 34 | 84 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 2.1E-32 | 35 | 92 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 1.18E-22 | 35 | 93 | IPR016177 | DNA-binding domain |
SMART | SM00380 | 6.4E-38 | 35 | 98 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 23.881 | 35 | 92 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 1.7E-10 | 36 | 47 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 1.7E-10 | 58 | 74 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0009414 | Biological Process | response to water deprivation | ||||
GO:0009737 | Biological Process | response to abscisic acid | ||||
GO:0045892 | Biological Process | negative regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 237 aa Download sequence Send to blast |
MRRGRGGGAT TIAAEQVVEP NRSAPQNIIN GKEPKYRGVR KRPWGRYAAE IRDPLKKTRV 60 WLGTYDSAED AARAYDAAAR TFRGPKAKTN FPIPASHLSP FTNQNFPDSF MDHRIYTTNG 120 FEEHHVNAQR PTSSSLSSTV ESFSGPRPPL QQPKAIKSSA PLAAAVAPRK HHPRTPPVVP 180 EDCHSDCDSS SSVVDDGDIA SSSSLCRKPL LLDLNFPPLD EVAFGSDDLH CTALWL* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5wx9_A | 3e-20 | 29 | 92 | 8 | 72 | Ethylene-responsive transcription factor ERF096 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Involved in the regulation of gene expression by abscisic acid, stress factors and by components of stress signal transduction pathways. Transcription factor that binds to the GCC-box pathogenesis-related promoter element. Part of a transcriptional repressor complex including a histone deacetylase. {ECO:0000269|PubMed:11487705, ECO:0000269|PubMed:15994908}. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00366 | DAP | Transfer from AT3G20310 | Download |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Manes.15G066800.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_021595836.1 | 1e-175 | ethylene-responsive transcription factor 3-like | ||||
Swissprot | Q9LDE4 | 3e-58 | ERF83_ARATH; Ethylene-responsive transcription factor 7 | ||||
TrEMBL | A0A2C9UFH7 | 1e-174 | A0A2C9UFH7_MANES; Uncharacterized protein | ||||
STRING | cassava4.1_034303m | 1e-175 | (Manihot esculenta) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF2263 | 34 | 84 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G20310.1 | 8e-36 | ethylene response factor 7 |
Link Out ? help Back to Top | |
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Phytozome | Manes.15G066800.1.p |
Publications ? help Back to Top | |||
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