PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.14G101900.1.p
Organism
Manihot esculenta
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family ERF
Protein Properties Length: 359aa    MW: 40001.2 Da    PI: 4.8672
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.14G101900.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP249.79.1e-16133180253
                  AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkl 53 
                          +  GVr++k +g+W+AeIr p++   + r +lg++ t eeAa+a++a ++++
  Manes.14G101900.1.p 133 KPVGVRQRK-WGKWAAEIRNPVT---KVRTWLGTYNTLEEAAQAYEAKKREY 180
                          789*****9.**********654...5********************99998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000185.43E-19132175No hitNo description
SMARTSM003803.5E-13133201IPR001471AP2/ERF domain
PfamPF008472.5E-10133181IPR001471AP2/ERF domain
PROSITE profilePS5103217.543133195IPR001471AP2/ERF domain
PRINTSPR003672.1E-6134145IPR001471AP2/ERF domain
SuperFamilySSF541711.31E-14135180IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.109.0E-19136180IPR001471AP2/ERF domain
PRINTSPR003672.1E-6156172IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 359 aa     Download sequence    Send to blast
MSEPRKQPLN HNKPRKKVTD TKSILPEELR MESKMRKIRV IYHDPYATDS DSSDDESEIN  60
VMRSYKSKRF VHEINLPSIV FPRSNPIEPE SSCQDSNNSG KIPNKRRRVL GKTTSSTATA  120
AKETTGTKVA PKKPVGVRQR KWGKWAAEIR NPVTKVRTWL GTYNTLEEAA QAYEAKKREY  180
DAMTMAASEK SHNISTSVAA SQSQNINKSN TNHNCSVSSD DTGSVLSHTS PSSVLELDTS  240
VVSNLNGDSS DLIKEGGFDT DVADLELSDL GFMNEPLGSC PGDEDLNLGL EFGNLIDDFG  300
QLYDEFCAIE DLEICRIDSD EPSELPDYDF EFGNEEFAYL DDHHHHQQHQ LPLNIACP*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1104108KRRRV
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.14G101900.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021592564.10.0ethylene-responsive transcription factor ERF119-like
TrEMBLA0A2C9UKM70.0A0A2C9UKM7_MANES; Uncharacterized protein
STRINGcassava4.1_010512m0.0(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF26903472
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G25890.21e-46ERF family protein