PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.14G075800.1.p
Organism
Manihot esculenta
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family WRKY
Protein Properties Length: 609aa    MW: 66290.7 Da    PI: 7.1548
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.14G075800.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY93.91.2e-29251310159
                          ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                 WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                          ++Dg++WrKYGqK  kg+++pr+YYrCt a +Cpv+k+v+r+aed +++++ Yeg+Hnh+
  Manes.14G075800.1.p 251 MNDGCQWRKYGQKIAKGNPCPRAYYRCTLAsSCPVRKQVQRCAEDMSILITSYEGTHNHP 310
                          58***************************99****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.3E-30236312IPR003657WRKY domain
SuperFamilySSF1182901.02E-26243312IPR003657WRKY domain
PROSITE profilePS5081128.105246312IPR003657WRKY domain
SMARTSM007746.2E-34251311IPR003657WRKY domain
PfamPF031066.0E-26252310IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 609 aa     Download sequence    Send to blast
MEDVMGRSGH GALLKEDKPA GDDDHHHEGA CKEEATAKVI PAKDKNERST TETDSKASSS  60
MQKEQDSSLK AVRAEMGEVR EENKRLKMHL GQMMKDYQAL HMKFYDIIQQ DETKKSTSTV  120
DNSHQAFEEP ELVSLSLGRF SSESKNDGKS KTYSHGKDEE DEKANNEGDL SLRLDCKFEV  180
SKFRNANETL PNPSSPVNIF KDKPKEEVEE TWPPPKVLKT MPSGGEDEVA QQCPLKKARV  240
YVRMRCDTPT MNDGCQWRKY GQKIAKGNPC PRAYYRCTLA SSCPVRKQVQ RCAEDMSILI  300
TSYEGTHNHP LPLSATFMAS TTSSAASMLL SGSLSSSFRT NPNPSATSSS TSADLHGLNF  360
YLAKDSNSNQ FYLHNSSLSA SPSHSTITID LTSNPSSSQF NRFNSSYAPN PKFAPASLNF  420
SSSESNVIPW GNGLLIHGST SQLYSRNQLG KLNLGGRPPM EHSLFQPYMQ QKTPVTSQQP  480
LPDTIAAATK AITTDPSFQS ALVAALKSII GNESGSDNGG SSDGASMGGG DHLAQKLKWG  540
EHFPLASGYL HLSSPTPKGN KIACTTSYLN KTTSANSQPE SMFLPTSLPF PSPKSASAFP  600
GDDRDHSN*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A2e-18238312174WRKY transcription factor 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.14G075800.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKT8276360.0KT827636.1 Manihot esculenta WRKY transcription factor 61 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021591934.10.0probable WRKY transcription factor 61
TrEMBLA0A2C9UKQ40.0A0A2C9UKQ4_MANES; Uncharacterized protein
STRINGcassava4.1_004929m0.0(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF65034134
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G18860.13e-62WRKY DNA-binding protein 61