PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Manes.14G031600.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
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Family | bHLH | ||||||||
Protein Properties | Length: 238aa MW: 26874.5 Da PI: 9.4867 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 40.3 | 5.5e-13 | 69 | 120 | 2 | 55 |
HHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 + h +Er+RR+++ + ++ Lr+llP ++K s ++ +Av+YIk+L+ Manes.14G031600.1.p 69 KLLHRDIERQRRQEMTTLYASLRSLLPLeY---IKGKRSISDHMNEAVNYIKHLK 120 6679************************77...********************95 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF47459 | 1.96E-14 | 66 | 140 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 1.35E-10 | 67 | 124 | No hit | No description |
PROSITE profile | PS50888 | 14.183 | 67 | 119 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 3.1E-10 | 69 | 119 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 1.4E-10 | 69 | 138 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 4.8E-5 | 73 | 125 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 238 aa Download sequence Send to blast |
MFPLQQGNEL CFQISSNTRN EIPQDLITSH PALYGSTDVA DDLGQSRRRK SISMDNDQSA 60 RDNSNDKKKL LHRDIERQRR QEMTTLYASL RSLLPLEYIK GKRSISDHMN EAVNYIKHLK 120 KRIKELDSKR DELKKKTNFR NIPIQSSGNS NNCSLSTGFI IRPCLSGIQI VFSSGFGEQS 180 SSLSRALQLL LEAEISVVNC VSTKVNERVF HTIHAEVKDS TCVNLSELQQ KLNPLVP* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 45 | 50 | SRRRKS |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Manes.14G031600.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_021593215.1 | 1e-175 | transcription factor bHLH36-like | ||||
TrEMBL | A0A2C9UJC8 | 1e-173 | A0A2C9UJC8_MANES; Uncharacterized protein | ||||
STRING | cassava4.1_030073m | 1e-174 | (Manihot esculenta) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF792 | 33 | 125 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G51790.1 | 1e-39 | bHLH family protein |
Link Out ? help Back to Top | |
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Phytozome | Manes.14G031600.1.p |