PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Manes.13G089700.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
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Family | bZIP | ||||||||
Protein Properties | Length: 361aa MW: 40440.2 Da PI: 6.4287 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 37.2 | 6.4e-12 | 76 | 117 | 4 | 45 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 +k +rr+++NReAAr+sR+RKka++++Le + +L + ++L Manes.13G089700.1.p 76 DKIQRRLAQNREAARKSRLRKKAYVQQLESSCLKLIQLEQEL 117 799***************************999998777655 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 4.5E-5 | 73 | 132 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.013 | 75 | 118 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 9.6E-9 | 76 | 115 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 8.44E-8 | 77 | 118 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 1.3E-8 | 78 | 119 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 80 | 95 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF14144 | 9.7E-29 | 163 | 237 | IPR025422 | Transcription factor TGA like domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 361 aa Download sequence Send to blast |
MDMYDHIHQI GMWGESFKSN GISNASASIF VAGNLDSSPS ILMAADTELD NQSEDTSHGT 60 LGPSSKYDLE ASKLTDKIQR RLAQNREAAR KSRLRKKAYV QQLESSCLKL IQLEQELEMA 120 RNQGLYIGGV ETSQMGFAGP INSGIATFEM GYRHWLEDQN KHTCDIRNAI NVHLSDIELR 180 ILVESGINHY SELFRMKAIA AKADVFYLMS GMWKSSAERF FLWIGGFRPS ELLKVLKPQL 240 EPLTDQQLLD VCNLKQSCQQ AEDALSQGME KLQQTLAETV AAGRLGEASH MPQMNTAMEK 300 LEGLVRFVQQ ADHLRQITLQ QMSLILTARQ AARGLLALGE YFERLRALST IWVTNPRELA 360 * |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. May be involved in the induction of the systemic acquired resistance (SAR) via its interaction with NPR1. Could also bind to the Hex-motif (5'-TGACGTGG-3') another cis-acting element found in plant histone promoters. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Manes.13G089700.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_021631617.1 | 0.0 | transcription factor TGA1-like isoform X1 | ||||
Refseq | XP_021631618.1 | 0.0 | transcription factor TGA1-like isoform X1 | ||||
Refseq | XP_021631619.1 | 0.0 | transcription factor TGA1-like isoform X1 | ||||
Refseq | XP_021631620.1 | 0.0 | transcription factor TGA1-like isoform X1 | ||||
Refseq | XP_021631621.1 | 0.0 | transcription factor TGA1-like isoform X1 | ||||
Refseq | XP_021631623.1 | 0.0 | transcription factor TGA1-like isoform X1 | ||||
Refseq | XP_021631624.1 | 0.0 | transcription factor TGA1-like isoform X1 | ||||
Refseq | XP_021631625.1 | 0.0 | transcription factor TGA1-like isoform X1 | ||||
Swissprot | Q39237 | 1e-170 | TGA1_ARATH; Transcription factor TGA1 | ||||
TrEMBL | A0A251JI52 | 0.0 | A0A251JI52_MANES; Uncharacterized protein | ||||
STRING | cassava4.1_032607m | 0.0 | (Manihot esculenta) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF1096 | 34 | 104 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G65210.5 | 1e-161 | bZIP family protein |
Link Out ? help Back to Top | |
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Phytozome | Manes.13G089700.1.p |