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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Manes.13G081100.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
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Family | ERF | ||||||||
Protein Properties | Length: 317aa MW: 34021.1 Da PI: 8.9493 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 66.7 | 4.4e-21 | 121 | 170 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+W+AeIrd + + r++lg+f+tae Aa+a+++a+++++g Manes.13G081100.1.p 121 KYRGVRQRP-WGKWAAEIRDpF-----KaSRVWLGTFDTAEAAARAYDEAALRFRG 170 8********.**********66.....56************************998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:3.30.730.10 | 2.0E-33 | 120 | 179 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 2.1E-14 | 121 | 170 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 5.3E-23 | 121 | 179 | IPR016177 | DNA-binding domain |
CDD | cd00018 | 1.18E-23 | 121 | 180 | No hit | No description |
SMART | SM00380 | 1.6E-38 | 121 | 184 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 25.673 | 121 | 178 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 6.3E-12 | 122 | 133 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 6.3E-12 | 144 | 160 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0006970 | Biological Process | response to osmotic stress | ||||
GO:0009749 | Biological Process | response to glucose | ||||
GO:0009788 | Biological Process | negative regulation of abscisic acid-activated signaling pathway | ||||
GO:0050832 | Biological Process | defense response to fungus | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 317 aa Download sequence Send to blast |
MASELCRERE MSAMVSALIH VVTGKIPKPS SSEYSLCNEG ANCSSSSSAG GGAKRPREAD 60 NGCQDFTKLS RPLVDDEFSH GRVTKDSKIA AAATTIIPPA EPMFTAIYEH NNTFQEEPMR 120 KYRGVRQRPW GKWAAEIRDP FKASRVWLGT FDTAEAAARA YDEAALRFRG SKAKLNFPEN 180 VKLRPSTPNA HLMNSDSPNT LLSVPTSTQV PMVNSQVAGS GESVNHSQLV LGIGSYQRPA 240 MNLYDKMVLP SSTASLHSQS STFVGSTSST FLLSSSLPHF FPPPSLGYLR RATNQSGGAD 300 TSGPSWSGSS HCSPSP* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1gcc_A | 2e-23 | 120 | 181 | 1 | 63 | ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1 |
Search in ModeBase |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00584 | DAP | Transfer from AT5G64750 | Download |
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Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Manes.13G081100.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_021633133.1 | 0.0 | ethylene-responsive transcription factor ABR1-like, partial | ||||
TrEMBL | A0A2C9UPR3 | 0.0 | A0A2C9UPR3_MANES; Uncharacterized protein | ||||
STRING | cassava4.1_026922m | 0.0 | (Manihot esculenta) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF4933 | 32 | 54 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G64750.1 | 2e-25 | ERF family protein |
Link Out ? help Back to Top | |
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Phytozome | Manes.13G081100.1.p |