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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Manes.13G051400.3.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
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Family | NAC | ||||||||
Protein Properties | Length: 342aa MW: 38389.9 Da PI: 7.9291 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 106.9 | 2.5e-33 | 12 | 135 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgk 88 lp+G rFhP+deelv++yLk+k ++++ + i+ev++++++P+dLp + ++++k wyfF+ ++++g +++r++k+gyWk tg Manes.13G051400.3.p 12 LPVGWRFHPSDEELVDYYLKRKRLDHPIYGLD-ISEVQVCDYDPRDLPgLsMNNSRDKVWYFFCLPLYHNNRG-QAKRKAKDGYWKGTGD 99 799************************98854.***************6434455888*******99887665.66666799******** PP NAM 89 dkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++v+ + ++e++g+k+tLvf+ +pk t+Wv+hey+ Manes.13G051400.3.p 100 LRSVTPEdSDEEIGTKRTLVFH---NPK--ATQWVIHEYEY 135 *****9867788**********...455..79*******85 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 2.22E-38 | 7 | 154 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 36.269 | 12 | 155 | IPR003441 | NAC domain |
Pfam | PF02365 | 9.0E-23 | 13 | 134 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 342 aa Download sequence Send to blast |
MTCPPQSDSQ NLPVGWRFHP SDEELVDYYL KRKRLDHPIY GLDISEVQVC DYDPRDLPGL 60 SMNNSRDKVW YFFCLPLYHN NRGQAKRKAK DGYWKGTGDL RSVTPEDSDE EIGTKRTLVF 120 HNPKATQWVI HEYEYTAALN LPTKGDYVLC KLKISKNKKK ASKKDEKAEP DSKKTRPNKK 180 SRKSESNGNL ASASASTSKN RKLEGMTTNS AYGEGEPNSL MILDLENQNL NTMASISTSN 240 KDEMSSLMTS NFENGYYKRA IVSTCNKGET SCPMASDLEN HCPEEMSAMS SYKKVNPSCP 300 RASVLENLSP NEITSLSTNS KGDTSFFRTC DIENKKSDSE S* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 1e-21 | 11 | 158 | 14 | 171 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Manes.13G051400.3.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_021611971.1 | 0.0 | NAC domain-containing protein 59-like isoform X2 | ||||
TrEMBL | A0A2C9UP08 | 0.0 | A0A2C9UP08_MANES; Uncharacterized protein | ||||
TrEMBL | A0A2C9UP13 | 0.0 | A0A2C9UP13_MANES; Uncharacterized protein | ||||
TrEMBL | A0A2C9UQA8 | 0.0 | A0A2C9UQA8_MANES; Uncharacterized protein |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G02230.1 | 1e-31 | NAC domain containing protein 4 |
Link Out ? help Back to Top | |
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Phytozome | Manes.13G051400.3.p |