PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.13G051400.1.p
Organism
Manihot esculenta
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family NAC
Protein Properties Length: 463aa    MW: 51661.5 Da    PI: 5.4307
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.13G051400.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM1064.5e-33201431128
                  NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgk 88 
                          lp+G rFhP+deelv++yLk+k  ++++   + i+ev++++++P+dLp   + ++++k wyfF+    ++++g +++r++k+gyWk tg 
  Manes.13G051400.1.p  20 LPVGWRFHPSDEELVDYYLKRKRLDHPIYGLD-ISEVQVCDYDPRDLPgLsMNNSRDKVWYFFCLPLYHNNRG-QAKRKAKDGYWKGTGD 107
                          799************************98854.***************6434455888*******99887665.66666799******** PP

                  NAM  89 dkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                           ++v+ + ++e++g+k+tLvf+   +pk   t+Wv+hey+ 
  Manes.13G051400.1.p 108 LRSVTPEdSDEEIGTKRTLVFH---NPK--ATQWVIHEYEY 143
                          *****9867788**********...455..79*******85 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.88E-3813162IPR003441NAC domain
PROSITE profilePS5100536.26920163IPR003441NAC domain
PfamPF023651.6E-2221142IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 463 aa     Download sequence    Send to blast
MTDNNSSGMT CPPQSDSQNL PVGWRFHPSD EELVDYYLKR KRLDHPIYGL DISEVQVCDY  60
DPRDLPGLSM NNSRDKVWYF FCLPLYHNNR GQAKRKAKDG YWKGTGDLRS VTPEDSDEEI  120
GTKRTLVFHN PKATQWVIHE YEYTAALNLP TKGDYVLCKL KISKNKKKAS KKDEKAEPDS  180
KKTRPNKKSR KSESNGNLAS ASASTSKNRK LEGMTTNSAY GEGEPNSLMI LDLENQNLNT  240
MASISTSNKD EMSSLMTSNF ENGYYKRAIV STCNKGETSC PMASDLENHC PEEMSAMSSY  300
KKVNPSCPRA SVLENLSPNE ITSLSTNSKG DTSFFRTCDI ENKKSDSENI PVPTEGEQIP  360
QSPSVASNAG ETTCQEVQSQ YKKTSVPIPE DYAGSSTTSN EEAMFQVQSQ YKNTEMPILK  420
DSGDLFTAFD AEAKFPEVRN ACLMEIFYSC EVKEANSVLK FT*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A4e-211916514170Stress-induced transcription factor NAC1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.13G051400.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021611970.10.0protein NTM1-like 9 isoform X1
TrEMBLA0A2C9UP080.0A0A2C9UP08_MANES; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF1703136
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G02230.13e-31NAC domain containing protein 4