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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Manes.13G047200.1.p |
| Organism |
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| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
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| Family |
Trihelix |
| Protein Properties |
Length: 315aa MW: 36660.8 Da PI: 4.5573 |
| Description |
Trihelix family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Manes.13G047200.1.p | genome | JGI | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | trihelix | 55.6 | 1.4e-17 | 40 | 127 | 2 | 86 |
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkm......rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdql 85
Wt+qe+ +Li+ ++e++ +l+rg+lk+ +Weev+ + ++ +qC++k+e+l+kr++++k++ + + + +++yfd +
Manes.13G047200.1.p 40 WTHQETIHLIQSYQEKWYSLKRGQLKASQWEEVAVTVaarcgyDYSHPAKTVIQCRHKMEKLRKRFREEKRRISI---TGVCSWQYFDLM 126
***********************************99855554333446889****************9998886...35568****999 PP
trihelix 86 e 86
e
Manes.13G047200.1.p 127 E 127
7 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 315 aa
Download sequence Send
to blast |
MSTPSPSPSP SPPPPSEPLS QSPPSNPRPL STKKPHPVPW THQETIHLIQ SYQEKWYSLK 60
RGQLKASQWE EVAVTVAARC GYDYSHPAKT VIQCRHKMEK LRKRFREEKR RISITGVCSW 120
QYFDLMESLE RGPMPISARP LALVPPNDNV DEDDEDFEEE AEVEDAEEEE EEEDYGHRSK 180
SRSINYILRK PTIVNRFAGS DSGFLRDTMN KRKREEMVED ENDDDGDDDD DNGEEEGERR 240
KGVELGLAEE IRAFAQRIVG MERKKMEMMK ETEKWRMEME NRRMEMILDS QRKIVSMISD 300
AFDSQEDLQM EQEF*
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