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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Manes.13G043000.3.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
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Family |
bHLH |
Protein Properties |
Length: 544aa MW: 59213.1 Da PI: 6.9621 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Manes.13G043000.3.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 50.3 | 4.4e-16 | 339 | 385 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
hn ErrRRdriN+++ L+el+P + K +Ka++L +A+eY+ksLq
Manes.13G043000.3.p 339 VHNLSERRRRDRINEKMKALQELIPRC-----NKSDKASMLDEAIEYLKSLQ 385
6*************************8.....6******************9 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0006783 | Biological Process | heme biosynthetic process |
GO:0009740 | Biological Process | gibberellic acid mediated signaling pathway |
GO:0009959 | Biological Process | negative gravitropism |
GO:0010100 | Biological Process | negative regulation of photomorphogenesis |
GO:0010161 | Biological Process | red light signaling pathway |
GO:0010187 | Biological Process | negative regulation of seed germination |
GO:0015995 | Biological Process | chlorophyll biosynthetic process |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0010313 | Molecular Function | phytochrome binding |
GO:0042802 | Molecular Function | identical protein binding |
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
Protein Sequence Length: 544 aa
Download sequence Send
to blast |
MNRYVPDFEI GDDCAIPTSS TFSRPKKSIT SEDDIMELLW QNGQVVVQSQ TQMSVKKAQH 60 HKYDDAVLPV EQSTPREIRS SSNEQQQHLF MQEDEMASWL HYPLNDTNFD QDFCADLLYP 120 STGYVSSTTT NTSAVPQRST HNPEARLHPT VSAASAMPTA TATASRPPIP PTRRAEVVQN 180 FGHFSRHRAK GGKSESGPSN LKNVVRESTV VDSTDTSATG SESRTSEAAF ARSAAGVSSV 240 NINASGTGSG AAVAGTSSRE GGSNNKDMTT REMTVTSSPG GSSASAEPPA LKLATDDRKR 300 KGREEDTEYH SEDVEFESAD AKRQVRGSTS TKRSRAAEVH NLSERRRRDR INEKMKALQE 360 LIPRCNKSDK ASMLDEAIEY LKSLQLQVQM MSMGCSMVPM MFSGIQQYMP PLRMGMGIGM 420 GMEMGMNRPM MPFPNVLAAA PMPTPVAAAH LGPRFPKPAF HMPPVPAPPP DPSRTQATNQ 480 SDPMLSAVSA QNPNQPRPPI FSDPYQQYLG LQQMQKPVSQ NQEMTRPGTS QAAENLDNSP 540 SGT*
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