 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Manes.12G150200.1.p |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
|
| Family |
Trihelix |
| Protein Properties |
Length: 494aa MW: 56756.3 Da PI: 5.6992 |
| Description |
Trihelix family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Manes.12G150200.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | trihelix | 96.3 | 2.9e-30 | 43 | 127 | 1 | 87 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87
rW++qe++aL+++r++m+ ++r++ lk+plW+evs+ ++e g++rs+k+Ckek+en+ k+y+++keg+++++++ +t+++f+qlea
Manes.12G150200.1.p 43 RWPQQETMALLKIRSDMDAAFREAGLKAPLWDEVSRLLSELGYNRSAKKCKEKFENIYKYYRRTKEGRSSKSNG--KTYRFFEQLEA 127
8********************************************************************97554..46*******85 PP
|
| 2 | trihelix | 103.3 | 1.8e-32 | 327 | 412 | 1 | 87 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87
rW+k+e+ aLi++r++++ +++++ k+plWeevs++m++ g++r++k+Ckekwen+nk++k+++e++k+r +++s+tcpyf+ql+a
Manes.12G150200.1.p 327 RWPKEEIEALIRLRTNLDMQYQENGPKGPLWEEVSAAMKKLGYNRNAKRCKEKWENMNKYFKRVRENNKRR-ADDSKTCPYFHQLDA 412
8********************************************************************98.89999********85 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 494 aa
Download sequence Send
to blast |
MEISTLPENS SAVTGNRGDE SGGFREEERV ESEEGDRYLI GSRWPQQETM ALLKIRSDMD 60
AAFREAGLKA PLWDEVSRLL SELGYNRSAK KCKEKFENIY KYYRRTKEGR SSKSNGKTYR 120
FFEQLEALDN SNGNNHVLLS SPSPDKVHSS MAATPVNPVN VNIGALPSSF QSPSAFVDSH 180
CTSTTSTSSE ESEGTRKKKR RLTQFFERLM KKVIEKQENL QRKFLDAIEK CEQDRMAREE 240
AWKMQELDRI KRERELLMQE RSIAAAKDAA VLSFLQKFSE QTSSVQLSEN QTIPVQLSEN 300
QISPVEIVVK AQENNSPQNF VHMSSSRWPK EEIEALIRLR TNLDMQYQEN GPKGPLWEEV 360
SAAMKKLGYN RNAKRCKEKW ENMNKYFKRV RENNKRRADD SKTCPYFHQL DALYKVKTRK 420
VDNSVNCGQE MKPEELLMHM MGSQEERQQQ ESATTEDGES ENVDQNQEGD RENDDEDGYR 480
IVANDPSAVA IME*
|
| Nucleic Localization
Signal ? help
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 |
| No. |
Start |
End |
Sequence |
| 1 | 196 | 200 | KKKRR |
| 2 | 196 | 201 | KKKRRL |
| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor that binds specific DNA sequence. {ECO:0000250}. |
