PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.12G005800.1.p
Organism
Manihot esculenta
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family WRKY
Protein Properties Length: 742aa    MW: 80428.3 Da    PI: 6.5562
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.12G005800.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY101.84.1e-32268325260
                          --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
                 WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 
                          +DgynWrKYGqK+vkgse+prsYY+Ct+++C+vkkk+e+s+ d++++ei+Y+g Hnh+k
  Manes.12G005800.1.p 268 EDGYNWRKYGQKQVKGSEYPRSYYKCTHPNCEVKKKIEHSH-DGQIMEIIYKGAHNHPK 325
                          7***************************************9.***************85 PP
2WRKY102.13.2e-32486544159
                          ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
                 WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                          ldDgy+WrKYGqK+vkg+++prsYY+CtsagC+v+k+ver++++ k+v++tYeg+Hnhe
  Manes.12G005800.1.p 486 LDDGYRWRKYGQKVVKGNPNPRSYYKCTSAGCSVRKHVERASHNLKYVITTYEGKHNHE 544
                          59********************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.806.2E-28266326IPR003657WRKY domain
SMARTSM007741.1E-35267325IPR003657WRKY domain
SuperFamilySSF1182901.7E-24267326IPR003657WRKY domain
PROSITE profilePS5081123.043268326IPR003657WRKY domain
PfamPF031061.6E-24268324IPR003657WRKY domain
Gene3DG3DSA:2.20.25.801.1E-35471546IPR003657WRKY domain
SuperFamilySSF1182905.36E-28479546IPR003657WRKY domain
PROSITE profilePS5081137.516481546IPR003657WRKY domain
SMARTSM007749.9E-37486545IPR003657WRKY domain
PfamPF031061.1E-24487544IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 742 aa     Download sequence    Send to blast
MDDNPPPQQP SSKTLVSSSI AHIDNFTDVD YTISSNDASE NAIRGSIAQR RAAKFGFKAE  60
KINTARFRTT SPLASPAEVG VRSPCITIPP GISPTALLDS PIMLPNSQPS PTTGTFPLPC  120
LHYESSMLNT VVPADANKGS NAGSFRFKPH KNPDPLPDFA TLENQGNNVN YQAVVSVGPS  180
MAFEFPVEFS KEATTENCAG GSATEMKVLN GTLANSDLSD VEMGHTDVAG NQTSIQMEPI  240
PGENVGAHNP HEEDKRTLPA PGNGRNSEDG YNWRKYGQKQ VKGSEYPRSY YKCTHPNCEV  300
KKKIEHSHDG QIMEIIYKGA HNHPKPQPNC RAQVGSASSF DEMPEMDEGG EIRVKVEVGS  360
VWKNSKPGPE DVKVGSEWKA DGLERTSSAS VVTELSDLLS ATQRKSMSTF KSAGTPELSS  420
TLVGNDDDCD DGATQGSISL GVDADVEESE SKRRKMESCG VETSLASRAV REPRVVVQIE  480
SEIDILDDGY RWRKYGQKVV KGNPNPRSYY KCTSAGCSVR KHVERASHNL KYVITTYEGK  540
HNHEVPAARN SNTMNSGGGS LSQITTNTQP ALALARNTGP KPETQIQDFV PGFNRKPVFN  600
NDYLRPSFAG NFSNGMKLGA STIYPLKYPT FQHTMPYGPF EINRSATHHS GSIASLVPDF  660
PISLPSSINA SVGLSLAGAD FNYNGKPIGQ SQALLSGQQM VKPKQEQRDD NLYDAEQSII  720
DHVNASPSSS SVYQRMRNFP S*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A2e-33268547878Probable WRKY transcription factor 4
2lex_A2e-33268547878Probable WRKY transcription factor 4
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.12G005800.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKT8276570.0KT827657.1 Manihot esculenta WRKY transcription factor 82 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021629940.10.0WRKY transcription factor SUSIBA2-like
TrEMBLA0A2C9UUC10.0A0A2C9UUC1_MANES; Uncharacterized protein
STRINGXP_002514852.10.0(Ricinus communis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF83493445
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56270.11e-100WRKY DNA-binding protein 2