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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Manes.11G156700.1.p |
| Organism |
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| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
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| Family |
C2H2 |
| Protein Properties |
Length: 306aa MW: 33080.1 Da PI: 4.4777 |
| Description |
C2H2 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Manes.11G156700.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-C2H2 | 13.9 | 0.00016 | 279 | 302 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHH.T CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirt.H 23
+ C+ C++sF + L++H + H
Manes.11G156700.1.p 279 FACKTCDRSFGSDAALQSHSKAkH 302
78*****************88767 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0009414 | Biological Process | response to water deprivation |
| GO:0009651 | Biological Process | response to salt stress |
| GO:0009737 | Biological Process | response to abscisic acid |
| GO:0045892 | Biological Process | negative regulation of transcription, DNA-templated |
| GO:0005730 | Cellular Component | nucleolus |
| GO:0046872 | Molecular Function | metal ion binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 306 aa
Download sequence Send
to blast |
MEFWGVEVKA GEPLKVTPEL DRIIHLSQAA LGESKKEKGN ESVPLFLKID DKKIVLGTLS 60
PEKIPQLSFD LVFEREVELS HNWKSGSVYF CGYQTPLPEE EEYPTLIGDS EDEEPFPLIN 120
ADNGSVQLQV ENAKPSKGKS TDAKPDASAK QKAKPVEPSK EAKAEDDSDD DDSDEDDDED 180
DSDDEEGDSD EEMSVDSEKE NDSDSEYEET PKKPEKGKKR SNDSATKTPV PAKKIKSDTP 240
QKTDGKKGGH TATPHPAKGK AAANGSNAKA QTPKSGGQFA CKTCDRSFGS DAALQSHSKA 300
KHGGK*
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| Functional Description ? help
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| Source |
Description |
| UniProt | Mediates the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events (By similarity). {ECO:0000250}. |
