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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Manes.11G151100.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
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Family |
MYB |
Protein Properties |
Length: 347aa MW: 38960.3 Da PI: 7.6813 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Manes.11G151100.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 51.4 | 2.4e-16 | 14 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48
+g+W++eEd +l+++++++G+g +W + +++ g++R++k+c++rw++yl
Manes.11G151100.1.p 14 KGPWSPEEDSKLKEYIEKFGTGgNWIALPQKAGLKRCGKSCRLRWLNYL 62
79*********************************************97 PP
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2 | Myb_DNA-binding | 39.1 | 1.7e-12 | 69 | 111 | 2 | 46 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
g ++ eEd ++ +++ G++ W+ Ia+ ++ gRt++++k++w++
Manes.11G151100.1.p 69 GEFSDEEDRIICTLFANIGSR-WSIIAAQLP-GRTDNDIKNYWNT 111
789******************.*********.***********97 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 347 aa
Download sequence Send
to blast |
MGRAPCCDKA NVKKGPWSPE EDSKLKEYIE KFGTGGNWIA LPQKAGLKRC GKSCRLRWLN 60 YLRPNIKHGE FSDEEDRIIC TLFANIGSRW SIIAAQLPGR TDNDIKNYWN TKLKKKLMAV 120 APQSQTKPFS FPSPHHQSSP LSSHSLLSLY KDSSSSSFPY FPPNFKPFTT VFDPISPIPS 180 NLLAKNTTTT ATNSSSLFQT QESLLNPLHY YHPVKDSNNG SSSNNLLIFG SEASCSSNSD 240 GSCSQISYGG REIKQEDMGF QSYISNGYEE NQKFMFSYGI NSCNGSENLN QWTEKTTGYF 300 GETSPFEYDL EDVKQLISSS SNNSCNNNNN ILLDENKTQE KYMYYY*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KM052721 | 1e-117 | KM052721.1 Gossypium hirsutum RAX-like transcription factor RAX2 mRNA, complete cds. |