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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Manes.11G140800.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
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Family |
LBD |
Protein Properties |
Length: 195aa MW: 21277.1 Da PI: 5.1991 |
Description |
LBD family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Manes.11G140800.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | DUF260 | 137.6 | 4.3e-43 | 32 | 131 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleql 90
+CaaCk+lrr+Ca++Cvlapyfp ++p+kf ++h++FGasn++k+l++lpe++r da+ss+vyeA ar+rdPvyG++g i +lq+q+++l
Manes.11G140800.1.p 32 PCAACKILRRRCAEKCVLAPYFPPTEPAKFTIAHRVFGASNIIKFLQELPESQRADAVSSMVYEASARIRDPVYGCAGAICHLQKQVNEL 121
7***************************************************************************************** PP
DUF260 91 kaelallkee 100
+a+la++++e
Manes.11G140800.1.p 122 QAQLAKAQAE 131
******9987 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 195 aa
Download sequence Send
to blast |
MDHSEAANSN TNSTSPSSSC SPPPPPTVVI SPCAACKILR RRCAEKCVLA PYFPPTEPAK 60 FTIAHRVFGA SNIIKFLQEL PESQRADAVS SMVYEASARI RDPVYGCAGA ICHLQKQVNE 120 LQAQLAKAQA ELVNMQCQQA NLVAFLCMEM AQSPQQSSEQ SVDNFISTPQ SYQSNPCFME 180 DNNNFGSLWE PLWT*
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