 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Manes.11G121700.1.p |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
|
| Family |
FAR1 |
| Protein Properties |
Length: 225aa MW: 25805.5 Da PI: 7.9032 |
| Description |
FAR1 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Manes.11G121700.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | FAR1 | 84.7 | 1.5e-26 | 56 | 144 | 2 | 90 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90
fY+eYA+++GF +r+ + ++s+r+g+i r++ C+keg+ + + k + r++r++tr gCka+++vk +k+gkw++tk+++eHnH+l+
Manes.11G121700.1.p 56 FYDEYARQIGFVMRVMSCRRSERDGRILARRLGCNKEGYCVSIRGKFGNVRKPRPSTREGCKAMIHVKFDKSGKWVITKFVKEHNHPLV 144
9**************************************999999989***************************************96 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 225 aa
Download sequence Send
to blast |
MIYVAVDLDE GIEIAESSAG QELLVQENDS IVQGGDSIVE PQEGMEFESE DAAKIFYDEY 60
ARQIGFVMRV MSCRRSERDG RILARRLGCN KEGYCVSIRG KFGNVRKPRP STREGCKAMI 120
HVKFDKSGKW VITKFVKEHN HPLVVAPREA RQSMSEKDKK IQELTMELRN KKRLCATYQD 180
HLTAFMKIVE EHSEQLSKKV QNVARNLKEF ESIELELQQH RQSP*
|
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AC214628 | 1e-119 | AC214628.1 Populus trichocarpa clone POP040-F15, complete sequence. |
