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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Manes.11G087500.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
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Family |
SRS |
Protein Properties |
Length: 214aa MW: 23049 Da PI: 8.7138 |
Description |
SRS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Manes.11G087500.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | DUF702 | 189.4 | 1.4e-58 | 12 | 153 | 6 | 154 |
DUF702 6 asCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasaaeaaskrkrelkskkqsalsstklssae 95
++CqdCGnqakk+C ++RCRtCCks+gf+C+thv+stW+pa++rr r q l+++ ++aaa+ + ++ ++ + + + ++l ++
Manes.11G087500.1.p 12 SRCQDCGNQAKKECIYMRCRTCCKSKGFQCETHVRSTWIPAYRRRRRPQSLSSSCATAAAAVLAMQQ-QHSS------DQHNPKRLRENP 94
68*********************************************99888876666554333222.2222......223333444455 PP
DUF702 96 skkeletsslPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGlee 154
+ le+ ++P++v+s a frc rvss d++e+++ Yqt+v+igGh+fkGiLydqG+ee
Manes.11G087500.1.p 95 LTAGLEVGNFPAQVNSIATFRCFRVSSADKAEDQFVYQTSVNIGGHIFKGILYDQGPEE 153
56679999*************************************************97 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 214 aa
Download sequence Send
to blast |
MMMREGGLLC GSRCQDCGNQ AKKECIYMRC RTCCKSKGFQ CETHVRSTWI PAYRRRRRPQ 60 SLSSSCATAA AAVLAMQQQH SSDQHNPKRL RENPLTAGLE VGNFPAQVNS IATFRCFRVS 120 SADKAEDQFV YQTSVNIGGH IFKGILYDQG PEESSSGHLQ DPNLTNAGGA LSTATAALAS 180 TSSSVAADSL AASYTFPLNA FISGTQLFLH PKS*
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Best hit in Arabidopsis thaliana ? help
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Hit ID |
E-value |
Description |
AT5G66350.1 | 1e-47 | Lateral root primordium (LRP) protein-related |