PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.11G084700.8.p
Organism
Manihot esculenta
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family MYB_related
Protein Properties Length: 1126aa    MW: 122943 Da    PI: 4.4479
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.11G084700.8.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding31.73.7e-109811022346
                           SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
      Myb_DNA-binding    3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46  
                           rW++++ el++++++q+G++  + I + ++ gRt+ q+k+++ k
  Manes.11G084700.8.p  981 RWSKQDTELFYEGIRQFGTD-LSMIQQLFP-GRTRHQIKLKYKK 1022
                           9*******************.*********.***********87 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF159631.7E-289721056No hitNo description
PROSITE profilePS512939.8469771025IPR017884SANT domain
SMARTSM007171.4E-79781026IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.601.2E-59791022IPR009057Homeodomain-like
SuperFamilySSF466895.53E-109811028IPR009057Homeodomain-like
CDDcd001671.39E-69811022No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 1126 aa     Download sequence    Send to blast
MDSDLDSFDD ILLEPAVAHA RAAGKFQPRA KPRARKITST SLPSVLPSNT REKSDSSFPT  60
TLDTTKPVQS VNPLDDRLIS PVDSSLVLPS IVLGSEELLE NNKNNLKCEP LNSSTQTVGR  120
REDLASPDSL PSEFVVTDSS NNGYSNFLFI EAGSSRLDLD PVDVVVPDTT SSKDVTGNGS  180
KVPVSLSMTT LDVAGEPWKD NDRLSPHEKG SSVTSNLSPA RAENAGSVAA SLDGNGELNS  240
SLLKSVEDVD SLGFDLDQPD IMFPECHASD SRAGKKFQPK VRSHRRKEIS GSSMEQPATV  300
AAVNSHTTQP VESVLTMDKP VDPVCPSSPN LDNESNEPSK ENEVLLPHDN NLELVSPSSK  360
EFMPKGDMSS KEAYLAGLDS NFGQKPSGVA DSPIEVNSLG LDLDPFADIV LPPAISNARA  420
GGKFQPRGKA RPRKVTSESN SFAVSGATVE GPASVVSTVS DNLQSAKFID VGDGRLMDSV  480
YSTLTTMKSM ESKEALRNDD CTNSGVLLFK VDRSSGLENS SHLVASDALH IGDIDRDPHS  540
GLGKSIGENA DIFSGLEYIH DFVTQSPRTE IPLPASSDGT EEHSRFPAQI SVNSSAPGAC  600
NEATENVVTC NEAAVEIDNG KPQSDEPGSF PDFESPGILS ESAIALECCT RNTQPKSMVQ  660
NGKEIPSTSI LPDASPPNTQ IDPSESVYID VGSIPTFPSE DVLDYSSISF GNFIPADPTR  720
SEFPVNEERT NLAETSCSSD LNILHHEDVS TVPAKESSKD RKRKSSSASY LAQNESVKSA  780
RQLRKRTIAS QVVDGPEDEA QDSDGFPSEH RNSSIADGDI DYDYRVDEDN DNEDKVENTS  840
SSRRASKKSK KPMAEQEKKP VSRRKRKNDA PEQPNQQSRK KFSHSTRRKS RLKDLLSIPE  900
DEIDYQKMPF KDIILLAGYK EDLAIKEAKA SKNSTKKSTN SLHGEEEDDT VTSEQDGGVA  960
DDQSNSLFNC HSFMDKTPTA RWSKQDTELF YEGIRQFGTD LSMIQQLFPG RTRHQIKLKY  1020
KKEERQHPLR LSEALSNRAK DHSYFEKVME QLQQVAAQEE RESNRGNSVS LTDDEEAQLN  1080
PETNEEVAKS DEQDEDVTVD QDGDPLKYDE DDDDFDIWGS YKSEY*
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.11G084700.8.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021628026.10.0uncharacterized protein LOC110626433
TrEMBLA0A2C9UZB10.0A0A2C9UZB1_MANES; Uncharacterized protein
STRINGcassava4.1_000789m0.0(Manihot esculenta)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G39160.16e-40MYB_related family protein