 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Manes.11G015400.1.p |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
|
| Family |
Trihelix |
| Protein Properties |
Length: 363aa MW: 39807.7 Da PI: 9.9415 |
| Description |
Trihelix family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Manes.11G015400.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | trihelix | 46.7 | 8.1e-15 | 68 | 155 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86
+W++ + +Li+a e+ +l+rg+lk+++W+ev++ + + ++ +qCk++++ ++k+yk +k+ + + s++p+f++l+
Manes.11G015400.1.p 68 CWSEGATAVLIDAWGERYLELSRGNLKQKHWKEVADIVssreDYMKAAKTDIQCKNRIDTVKKKYKLEKAKIAAG--GGPSKWPFFERLD 155
7*************************************85333344567889******************99997..67779******98 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 363 aa
Download sequence Send
to blast |
MEDDEEIQSH ASAATGSPSP SPPNGRITVT VAAAPPSSHH LQQQNDNSLS LTLPIQQPKT 60
NGGGREDCWS EGATAVLIDA WGERYLELSR GNLKQKHWKE VADIVSSRED YMKAAKTDIQ 120
CKNRIDTVKK KYKLEKAKIA AGGGPSKWPF FERLDQLIGP AAKIPVTATA AAASLSSKVP 180
VGIPVGIRSG GASGSNQYQF PQGKAQMKSN PVTKNQNVKA QLRKRAQVET ESSSEEEENF 240
PDSDDSLPQE KKPRGVQRGV NTKGVKERKG WGNSIRMLTQ AILKFGEAYE QAESAKLQQV 300
VEMEKTRMKF AKELELQRMQ FFMKTQMEIS QLKRGRRAGN GSNHHISGNS IIHNNDNSDS 360
DN*
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription regulator that may repress the maturation program during early embryogenesis. {ECO:0000269|PubMed:21330492}. |
| Best hit in Arabidopsis thaliana ? help
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| Hit ID |
E-value |
Description |
| AT3G14180.1 | 6e-57 | sequence-specific DNA binding transcription factors |
