PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.10G132400.1.p
Organism
Manihot esculenta
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family bHLH
Protein Properties Length: 469aa    MW: 52496.6 Da    PI: 5.819
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.10G132400.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH46.28.1e-15256302354
                          HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                  HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                          ++h + Er+RR+++N+++  Lr+l+P++     +K++ a+++  A+eYIk+L
  Manes.10G132400.1.p 256 TKHFATERQRRQHLNDKYKALRDLVPNP-----TKNDRASVVGDAIEYIKEL 302
                          78**************************.....9****************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.955253302IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.88E-13254306No hitNo description
SuperFamilySSF474592.97E-16255320IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.109.1E-14256314IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.2E-12256302IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003535.2E-12259308IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 469 aa     Download sequence    Send to blast
MYVEIGCSFD PNSMVEGPED EICQVLQPPP HPPQMAETTT NDLSFEENLK LSTEELQNLK  60
LSKERLSYHH SNFHHQEDDA SASMEIHLQN HQQMAFNNTH LMQDSSNQVL TFTSSDLLNL  120
FHLPRSSASS LLPDSSISFT NTTHTTPLGF VEDLPMADTA AASSILYDPL FHLNLPPQPP  180
LFKELFQSLP SHGYSLPASS RGSSLFPGGG DDHVEGSGGG GLYQDGDVEH QFDNGVLDFT  240
WDMACIGKGR EAGKMTKHFA TERQRRQHLN DKYKALRDLV PNPTKNDRAS VVGDAIEYIK  300
ELLRTVNELK ILVDQKRCAR ERSKRRKTED DSTENAGSEI CSAMKSLGDH PDHHQSFNNG  360
SLRSSWLQRK SKDTEVDVRI IDDEVTIKLV QRKKINCLLF VSKVVDELKL DLHHVAGGHI  420
GDYYSFLFNT KIYEGSSVYA SAIANKLIEV VDRHYYASTP STSCYIQN*
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.10G132400.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021624684.10.0transcription factor bHLH91-like
TrEMBLA0A2C9V5X40.0A0A2C9V5X4_MANES; Uncharacterized protein
STRINGcassava4.1_031386m0.0(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF37433262
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31210.12e-95bHLH family protein