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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Manes.10G052500.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
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Family |
NAC |
Protein Properties |
Length: 566aa MW: 62802 Da PI: 4.2399 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Manes.10G052500.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 166.8 | 7.4e-52 | 10 | 137 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgk 88
l+pGfrFhPtdeelv +yLk+kv++k++++ + i+ vdiyk+ePwdLp k k+k+++ ewyfFs dkky++g+++nrat++gyWk+tgk
Manes.10G052500.1.p 10 LAPGFRFHPTDEELVRYYLKRKVTNKPFRF-DPIAVVDIYKTEPWDLPdKsKLKSRDLEWYFFSMLDKKYSNGSKTNRATEKGYWKTTGK 98
579**************************9.99**************95347777888******************************** PP
NAM 89 dkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
d+++ + ++vg+kktLv++ grap+ge+t+Wvmheyrl
Manes.10G052500.1.p 99 DRPIRW-NFRTVGMKKTLVYHLGRAPRGERTNWVMHEYRL 137
*****9.9999***************************98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0009644 | Biological Process | response to high light intensity |
GO:0009962 | Biological Process | regulation of flavonoid biosynthetic process |
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0005737 | Cellular Component | cytoplasm |
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 566 aa
Download sequence Send
to blast |
MARGDSATSL APGFRFHPTD EELVRYYLKR KVTNKPFRFD PIAVVDIYKT EPWDLPDKSK 60 LKSRDLEWYF FSMLDKKYSN GSKTNRATEK GYWKTTGKDR PIRWNFRTVG MKKTLVYHLG 120 RAPRGERTNW VMHEYRLADE DLEKAGVVQD AFVLCRIFQK SGTGPKNGEQ YGAPFVEEEW 180 DDDEVVGMLL PGEDMVVADE VVLGDDVCAE NDLDQNVDGV SSENAILPVN YYHGETNNYV 240 EASGDLSVDD QKPIIDQGTV QYGSDLPDDQ SLFVLPGQYD IDAKSVRHEY IAESSNNANV 300 VEDNFMLDEP FFDAIDNLPF SEGLFLEAND LSNLVEPDST GDSTIFDVVD EYLNFFDAND 360 DNLTFDPSEL LGTDSTATDQ APLSENIKDV NGGTEEVPMA TEKLLATYGN TDASSSKQQK 420 PEATKIESDI KYPFMKQASH LLGSIPAPPA FASEFPIKDA ALHLNAAQSS SSIHVTAGVI 480 RIENITFGSS GMDWSFSKNA NVNVILSFGM LQDNASSTPT SLVPIGSLFT SKTLSLLSQS 540 WFSLMCFWVL ILSLSYKIGT CVCTK*
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Functional Description ? help
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Source |
Description |
UniProt | Transcriptional activator activated by proteolytic cleavage through regulated intramembrane proteolysis (RIP) (By similarity). Transcripition activator associated with the induction of genes related to flavonoid biosynthesis and required for the accumulation of anthocyanins in response to high light stress (PubMed:19887540). Plays a role in the regulation of 20S and 26S proteasomes in response to high light stress (PubMed:21889048). {ECO:0000250|UniProtKB:Q949N0, ECO:0000269|PubMed:19887540, ECO:0000269|PubMed:21889048}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: By exposure to high light (PubMed:19887540). Induced by heat and methyl methanesulfonate (MMS) treatment (PubMed:17158162). {ECO:0000269|PubMed:17158162, ECO:0000269|PubMed:19887540}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KR605143 | 0.0 | KR605143.1 Manihot esculenta NAC transcription factors 5 mRNA, complete cds. |
Publications
? help Back to Top |
- Duarte JM, et al.
Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis. Mol. Biol. Evol., 2006. 23(2): p. 469-78 [PMID:16280546] - Ding Y, et al.
Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] - Liang M, et al.
Subcellular Distribution of NTL Transcription Factors in Arabidopsis thaliana. Traffic, 2015. 16(10): p. 1062-74 [PMID:26201836] - Xiao D, et al.
SENESCENCE-SUPPRESSED PROTEIN PHOSPHATASE Directly Interacts with the Cytoplasmic Domain of SENESCENCE-ASSOCIATED RECEPTOR-LIKE KINASE and Negatively Regulates Leaf Senescence in Arabidopsis. Plant Physiol., 2015. 169(2): p. 1275-91 [PMID:26304848] - Hu W, et al.
Genome-Wide Identification and Expression Analysis of the NAC Transcription Factor Family in Cassava. PLoS ONE, 2015. 10(8): p. e0136993 [PMID:26317631] - Gladman NP,Marshall RS,Lee KH,Vierstra RD
The Proteasome Stress Regulon Is Controlled by a Pair of NAC Transcription Factors in Arabidopsis. Plant Cell, 2016. 28(6): p. 1279-96 [PMID:27194708] - Tang Y,Zhao CY,Tan ST,Xue HW
Arabidopsis Type II Phosphatidylinositol 4-Kinase PI4Kγ5 Regulates Auxin Biosynthesis and Leaf Margin Development through Interacting with Membrane-Bound Transcription Factor ANAC078. PLoS Genet., 2016. 12(8): p. e1006252 [PMID:27529511]
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