PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.09G173200.1.p
Organism
Manihot esculenta
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family ERF
Protein Properties Length: 233aa    MW: 25325.8 Da    PI: 4.2754
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.09G173200.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP244.92.9e-142977355
                  AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                         + GVr+++ + r+v eIrdps+   + r++lg+f+taeeAa a++ a++++ g
  Manes.09G173200.1.p 29 FLGVRRRP-WCRYVEEIRDPST---KERHWLGTFDTAEEAALAYDWAARSMTG 77
                         67******.**********965...5**********************99987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003808.9E-252891IPR001471AP2/ERF domain
PROSITE profilePS5103217.532885IPR001471AP2/ERF domain
CDDcd000189.40E-232884No hitNo description
PRINTSPR003675.7E-72940IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.103.2E-242985IPR001471AP2/ERF domain
SuperFamilySSF541711.05E-162986IPR016177DNA-binding domain
PfamPF008472.6E-73176IPR001471AP2/ERF domain
PRINTSPR003675.7E-75167IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 233 aa     Download sequence    Send to blast
MDFANSSSSS PSHSKTTRNQ QGQQEEVRFL GVRRRPWCRY VEEIRDPSTK ERHWLGTFDT  60
AEEAALAYDW AARSMTGFKA RTKFVYSDMP DISALFAPPC QYDCTFNFIA SFPYANSCGL  120
VAADDESVQR DGAGAGGTFQ PIAATMDVGG SNNCPGDNIE LPSLPPDMTS SCCYGSEVGH  180
GFWNESNLFG GSYLGFNVNE FVQQSPLFGR VPSVSDTVTD GLDLGSSSDF LF*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A5e-1425771164Ethylene-responsive transcription factor ERF096
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.09G173200.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021678632.11e-119ethylene-responsive transcription factor ERF087-like
TrEMBLA0A2C9VDX31e-172A0A2C9VDX3_MANES; Uncharacterized protein
STRINGcassava4.1_029915m1e-173(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF39043161
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13910.16e-29ERF family protein