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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Manes.09G125000.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
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Family | NAC | ||||||||
Protein Properties | Length: 185aa MW: 21981.9 Da PI: 7.6275 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 73.8 | 4.2e-23 | 17 | 112 | 6 | 107 |
NAM 6 rFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 +P+++elv+++Lk + g+++++ + i+e+diyk ePwdLp + + ee+ewyfF++ +++ ++ +t+ gyWk+tg+++++ + Manes.09G125000.1.p 17 GSRPKEKELVDHFLKLMLLGHDHQV-RRIPELDIYKREPWDLPlFRSELEEEEWYFFHPCRSRW-----PRETTEVGYWKNTGRKRKIRD 100 568*******************999.77***************778888999*******98864.....4558999*************9 PP NAM 95 kkgelvglkktLv 107 +e++g+k+t+ Manes.09G125000.1.p 101 -AQEEIGTKRTFR 112 .8899*****986 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 3.66E-23 | 10 | 112 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 21.109 | 12 | 157 | IPR003441 | NAC domain |
Pfam | PF02365 | 3.0E-10 | 17 | 112 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 185 aa Download sequence Send to blast |
MTSTTSPSES VQDVGAGSRP KEKELVDHFL KLMLLGHDHQ VRRIPELDIY KREPWDLPLF 60 RSELEEEEWY FFHPCRSRWP RETTEVGYWK NTGRKRKIRD AQEEIGTKRT FRAFVLRKLF 120 KKPMPVTGEE ELRRTLAACD LENQNPYQRT HNPVLNEGET NQLMTSETTD IGFSKEMRQE 180 KALWN |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Manes.09G125000.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_021674949.1 | 2e-81 | NAC domain-containing protein 62-like, partial | ||||
TrEMBL | A0A2C9VAA3 | 1e-135 | A0A2C9VAA3_MANES; Uncharacterized protein (Fragment) | ||||
STRING | cassava4.1_032712m | 1e-136 | (Manihot esculenta) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF22585 | 3 | 3 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G33060.2 | 3e-22 | NAC 014 |
Link Out ? help Back to Top | |
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Phytozome | Manes.09G125000.1.p |