PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.09G067200.1.p
Organism
Manihot esculenta
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family MYB_related
Protein Properties Length: 800aa    MW: 88789.4 Da    PI: 6.352
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.09G067200.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding28.34.1e-095294347
                         SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
      Myb_DNA-binding  3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                         +WT eE+e +  a +q G++ +++I r+++  +   q++++++ +
  Manes.09G067200.1.p 52 AWTREEEESFFTALRQVGKN-FEKITRRVQ-SKNKDQVRHYYYRL 94
                         6*****************99.*********.***********976 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466897.48E-114299IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.604.7E-64797IPR009057Homeodomain-like
PROSITE profilePS5129313.2644899IPR017884SANT domain
SMARTSM007176.5E-74997IPR001005SANT/Myb domain
CDDcd001677.51E-75295No hitNo description
PfamPF002491.4E-65294IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 800 aa     Download sequence    Send to blast
MDMESQVCLG SKVHSCIENT SIQHGDTGIT SLIQDRVEPQ QPAKRPTRQW AAWTREEEES  60
FFTALRQVGK NFEKITRRVQ SKNKDQVRHY YYRLVRRMNK LLGPGLCLDA KNSKDTNAAM  120
LRWWSLLEKY SCKASKLHLK PRRFKIFIEA LENQLLKDRK KNVRKRPPQL ENGPPTVPNT  180
VTSQNRASGH ETRTVKLVLV DSQNLQRLGA GKGSLKRNVN IGVIRSNRGD STAMKPARQR  240
RKQGIFKSAA YKKWEKAAIA GVSLVADAAE HLERTATDKG IEHEHSMAEC KSPDPMEKGV  300
PPLPAFSQNH YVGSNAQTNM KLKLQLFPID DGTRRALEMD KHNPYLELTL STRKKISSVL  360
EHLNQKWGNS RIASGELMLF PYSAHRENFV GHQRWTQDAI VSAADVHTSI GSPPVFRLRY  420
GWFSTIELAS ATLQETSVSS SIPGRDTVDV ENEKRKIVDS VSSSGLSADD KSEENMTHCE  480
DQLTIGNKLH ASAPQFTSVP DDLSGFIATE PSNNIVMSSD SAARESWHEK EAVDGANMKQ  540
LDNVDDLRLS SGTALSAGEW ADSLTNISVG DLLSEVPHDV DPNCFEPPIA QSGQCIQQIP  600
FSCDSFDAAI AAHMSRHQNK MEFSSAVASH TSSIWDAEET CDAFSFQKDH AFYQEIPTSI  660
DVITPDTDKQ MNSMVSGDFI EGSPNGEGHV DYPAETGPMN ECSPDPHGVD NSAKDFTGLT  720
DIYWPESLGP LDLDIPSSKY HNEEFILSDS LSGLNRLIAS SLDAFQNCSF FGLDKKDLMP  780
VIEARESTSF SDFKIGNGA*
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.09G067200.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021623396.10.0TSL-kinase interacting protein 1-like isoform X2
SwissprotQ8LJT80.0TKI1_ARATH; TSL-kinase interacting protein 1
TrEMBLA0A2C9V8E60.0A0A2C9V8E6_MANES; Uncharacterized protein
STRINGcassava4.1_002262m0.0(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF98832531
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36960.10.0TSL-kinase interacting protein 1