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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Manes.09G023500.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
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Family |
C2H2 |
Protein Properties |
Length: 294aa MW: 32420.9 Da PI: 8.3327 |
Description |
C2H2 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Manes.09G023500.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-C2H2 | 12.2 | 0.00054 | 227 | 249 | 2 | 23 |
EETTTTEEESSHHHHHHHHHH.T CS
zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23
+Cp Cg +Fs+ + L+ H ++ H
Manes.09G023500.1.p 227 ECPQCGARFSSVMVLVEHVQKvH 249
5*****************99988 PP
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2 | zf-C2H2 | 16.9 | 1.8e-05 | 265 | 287 | 2 | 23 |
EETTTTEEESSHHHHHHHHHH.T CS
zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23
+Cp+C+k F+++ L+ H + H
Manes.09G023500.1.p 265 VCPKCSKGFRDPVALVEHVERdH 287
7*****************99888 PP
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Protein Features
? help Back to Top |
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Database |
Entry ID |
E-value |
Start |
End |
InterPro ID |
Description |
SuperFamily | SSF118310 | 4.19E-13 | 6 | 50 | No hit | No description |
PROSITE profile | PS51039 | 8.091 | 10 | 56 | IPR000058 | Zinc finger, AN1-type |
Gene3D | G3DSA:4.10.1110.10 | 1.2E-10 | 11 | 53 | IPR000058 | Zinc finger, AN1-type |
Pfam | PF01428 | 1.9E-13 | 13 | 51 | IPR000058 | Zinc finger, AN1-type |
SMART | SM00154 | 0.0017 | 13 | 52 | IPR000058 | Zinc finger, AN1-type |
Gene3D | G3DSA:4.10.1110.10 | 9.1E-11 | 90 | 149 | IPR000058 | Zinc finger, AN1-type |
SuperFamily | SSF118310 | 3.14E-9 | 93 | 144 | No hit | No description |
PROSITE profile | PS51039 | 7.988 | 98 | 146 | IPR000058 | Zinc finger, AN1-type |
Pfam | PF01428 | 5.5E-8 | 101 | 141 | IPR000058 | Zinc finger, AN1-type |
SMART | SM00154 | 0.03 | 101 | 142 | IPR000058 | Zinc finger, AN1-type |
SMART | SM00355 | 0.018 | 226 | 249 | IPR015880 | Zinc finger, C2H2-like |
PROSITE profile | PS50157 | 9.078 | 226 | 254 | IPR007087 | Zinc finger, C2H2 |
SuperFamily | SSF57667 | 9.26E-5 | 227 | 283 | No hit | No description |
PROSITE pattern | PS00028 | 0 | 228 | 249 | IPR007087 | Zinc finger, C2H2 |
PROSITE profile | PS50157 | 8.85 | 264 | 292 | IPR007087 | Zinc finger, C2H2 |
SMART | SM00355 | 5.4 | 264 | 287 | IPR015880 | Zinc finger, C2H2-like |
PROSITE pattern | PS00028 | 0 | 266 | 287 | IPR007087 | Zinc finger, C2H2 |
Sequence ? help Back to Top |
Protein Sequence Length: 294 aa
Download sequence Send
to blast |
MGTPQFPDLG KHCTREDCKQ IDFLPFTCDR CLQVFCLEHR SYAKHGCPKA DRQDVTVVIC 60 PLCAKGVRLN PDEDPNISWE THVNTECDPS NYEKVTKKRK CPVRGCREVL TFSNTIKCRD 120 CTIDHCLKHR FGPDHDCPGP KKLEAGFQFL SLLNRSRKEE SKPNKTPAAS STKWASAFRN 180 AASTVRASAE AGVAKLSTEI SQAWQTAKSP AGPSSSNGRD AIGLEEECPQ CGARFSSVMV 240 LVEHVQKVHE RSANQSRVLK LPVDVCPKCS KGFRDPVALV EHVERDHGGT SKA*
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Functional Description ? help
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Source |
Description |
UniProt | May be involved in environmental stress response. {ECO:0000250}. |