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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Manes.08G154100.1.p |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
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| Family |
LBD |
| Protein Properties |
Length: 226aa MW: 24618.9 Da PI: 7.5362 |
| Description |
LBD family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Manes.08G154100.1.p | genome | JGI | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF260 | 124.6 | 5e-39 | 31 | 132 | 1 | 101 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleq 89
+C aCk+lrrkC ++C++ap+f ++q +++fa+vhk+FGasnv+kll ++p ++r++a+ ++ yeA+ar++dPvyG+v++il+lqqq+++
Manes.08G154100.1.p 31 PCGACKFLRRKCISGCIFAPHFGSDQgAARFAAVHKVFGASNVSKLLLHIPVNRRHEAVVTISYEAQARLSDPVYGCVSTILALQQQVAS 120
7***********************9989************************************************************** PP
DUF260 90 lkaelallkeel 101
l+aela+++++l
Manes.08G154100.1.p 121 LQAELAMVQTQL 132
*******99885 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0009867 | Biological Process | jasmonic acid mediated signaling pathway |
| GO:1900150 | Biological Process | regulation of defense response to fungus |
| Sequence ? help Back to Top |
| Protein Sequence Length: 226 aa
Download sequence Send
to blast |
MADPQCDTRR KAIGKRASAM QVETKSVAVA PCGACKFLRR KCISGCIFAP HFGSDQGAAR 60
FAAVHKVFGA SNVSKLLLHI PVNRRHEAVV TISYEAQARL SDPVYGCVST ILALQQQVAS 120
LQAELAMVQT QLINSRFIMA NVLQNSQQQQ HMAMLQPAYS NNSSASTNLI HMSSFTSNFD 180
LVTDTAPSSH SLDPLQLSRP SLDEEDEEQE SQIPGIFDGE GFHRR*
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