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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Manes.08G092900.1.p |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
|
| Family |
Trihelix |
| Protein Properties |
Length: 266aa MW: 31908.1 Da PI: 8.7935 |
| Description |
Trihelix family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Manes.08G092900.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | trihelix | 77 | 3e-24 | 23 | 105 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86
+W+ qe+++ + +r e+++++ ++k++k lWe vs+km+e+gf rs++qCk+kw+nl +ryk ++++e + + +++p++++l+
Manes.08G092900.1.p 23 QWSIQETKEFLMIRAELDRTFMETKRNKLLWEVVSNKMKEKGFYRSAEQCKCKWKNLVTRYKGCETMETES--LR-QQFPFYNELQ 105
7********************************************************************94..44.489*****97 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 266 aa
Download sequence Send
to blast |
MEGYHHHQQH HISVNVDTDR FPQWSIQETK EFLMIRAELD RTFMETKRNK LLWEVVSNKM 60
KEKGFYRSAE QCKCKWKNLV TRYKGCETME TESLRQQFPF YNELQEIFGA RMQRMLWAEA 120
EGAAASSKKK AVQLSSDEED DNEESEGEKE SVRKKKKAKR TTNIGGGGGG SGNNNNIREI 180
LQDFMKQQMQ MEMQWREAFD ARENDRRLKE MEWRQKMEAL ENERIMMERR WREREEQRRI 240
REEARAEKRD ALITALLNKL RREEI*
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor that binds specifically to the core DNA sequence 5'-GTTAC-3'. {ECO:0000269|PubMed:15044016}. |
