PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.08G009700.5.p
Organism
Manihot esculenta
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family MYB_related
Protein Properties Length: 791aa    MW: 87771.2 Da    PI: 6.8224
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.08G009700.5.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding28.34e-095193347
                         SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
      Myb_DNA-binding  3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                         +WT eE+e +  a +q G++ +++I r+++  +   q++++++ +
  Manes.08G009700.5.p 51 AWTREEEESFFTALRQVGKN-FEKITRRVQ-SKNKDQVRHYYYRL 93
                         6*****************99.*********.***********976 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466897.33E-114298IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.604.5E-64596IPR009057Homeodomain-like
PROSITE profilePS5129313.2644798IPR017884SANT domain
SMARTSM007176.5E-74896IPR001005SANT/Myb domain
PfamPF002491.4E-65193IPR001005SANT/Myb domain
CDDcd001677.40E-75194No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 791 aa     Download sequence    Send to blast
MELESQVSLD TNVHSHTENT SIQHGDTGTS SIPDHDKLQQ PVKKPTRQWA AWTREEEESF  60
FTALRQVGKN FEKITRRVQS KNKDQVRHYY YRLVRRMNKL LGPGLCLDAK NSKDTNAAML  120
RWWSLLEKYS CKASKLHLKP RRFKIFIEAL ETQLLKDRKK NVRKRPSQVE NGSPTVPSTI  180
TSQNRASAHE TRTVKLVLVD SQNLQRLGAG KGSLKRNVNI GVIRSNRGDS TAMKPARQRR  240
KPAAYKKWEK AAIAGVSLVA DAAEHLERTA TDKEGENDHH VPEHKSPDAI EKGLPSLPSF  300
SQNHYVEVNA QTNIKLKLQL FPIDDDTRRA LEMDKHNPYL ELTLSTRKKI SSVLEHLYRK  360
WGNSSIASGE LMLFPYTAHR ENLVSYQRWT RDSIVSASDV YASIGSPPVF RLRYGWFSNI  420
ELANAMLQAP SASNFIPGGN SVDMESEKRK IVDSVSTSGL STNDRSEKNM DFYKDQLSAG  480
NKSHASAPPT TDVLNDYIAE GPRNNFVGSS VPAAKVSWHE NEIGNKTNMR QLHDAGDQKL  540
CNGIASSAGE WADSLTNISV GDLLSEVPHN VDPNCIEALT AQSSHCLQEM PFSCDSFDAA  600
IAAHMSRHQS KMVFPSTVTS NTSSIWDAEE TCDAFSFQKN HAPHLEIPTS IDVVPQGADK  660
QTNSMVSGAF VEGLPSGEGP VDYPAETDPM DDCSTDPLVV DNLAKDFTGL TDIYWPESLG  720
PLDLDIPSSR YHSEEFLLSD SLSGLNRLIA SSLDAFQSCS FFGLDKKDSI PVVEARESSS  780
FSDFKIGSGV *
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.08G009700.5.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021621182.10.0TSL-kinase interacting protein 1-like isoform X3
SwissprotQ8LJT80.0TKI1_ARATH; TSL-kinase interacting protein 1
TrEMBLA0A251K9500.0A0A251K950_MANES; Uncharacterized protein
STRINGcassava4.1_002262m0.0(Manihot esculenta)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36960.30.0TSL-kinase interacting protein 1