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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Manes.07G132100.2.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
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Family |
Trihelix |
Protein Properties |
Length: 342aa MW: 38459.7 Da PI: 9.397 |
Description |
Trihelix family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Manes.07G132100.2.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | trihelix | 42.8 | 1.3e-13 | 103 | 186 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm..rergf..erspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86
+W++ + +Liea ++ +l+rg+l++++W+ev++ + r+ g+ +++ +qCk++++ l+k+yk +k+ s++p++ +l+
Manes.07G132100.2.p 103 CWSEGATETLIEAWGDRYINLNRGNLRQKDWKEVADTVngRQNGVkpRKTDVQCKNRIDTLKKKYKLEKAKPPP------SKWPFYYRLD 186
7*************************************998888865679******************999886......5799999887 PP
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Protein Features
? help Back to Top |
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Database |
Entry ID |
E-value |
Start |
End |
InterPro ID |
Description |
Pfam | PF13837 | 2.6E-26 | 101 | 188 | No hit | No description |
Sequence ? help Back to Top |
Protein Sequence Length: 342 aa
Download sequence Send
to blast |
MLIIQTLPYK VISRLTPIRE ADVIAGLNAR PSLPLPLSTS PTNPILFSII LHPLSLRRTL 60 APSAIHSPTS HTPLPLFPMD PIRSVHHSTR PSASGGGGGR EDCWSEGATE TLIEAWGDRY 120 INLNRGNLRQ KDWKEVADTV NGRQNGVKPR KTDVQCKNRI DTLKKKYKLE KAKPPPSKWP 180 FYYRLDSLIG ANATVNPKKK AAAATFPVKS TPSIKPELYT GVSNSTEASF DDEKDEDDDD 240 IGFDERAIKK QHRIEDVDFS DGAACRELAR AILKFGEIYE RIESSKQQQM VELEKQRMEF 300 TKELEFERMN MFMDAQLELE KKSSKRSKYA SSGSDVKQSR E*
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Functional Description ? help
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Source |
Description |
UniProt | Transcription regulator that may repress the maturation program during early embryogenesis. {ECO:0000269|PubMed:21330492}. |
Best hit in Arabidopsis thaliana ? help
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Hit ID |
E-value |
Description |
AT5G05550.1 | 4e-70 | sequence-specific DNA binding transcription factors |