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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Manes.07G058400.1.p |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
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| Family |
LBD |
| Protein Properties |
Length: 221aa MW: 23974.3 Da PI: 7.5762 |
| Description |
LBD family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Manes.07G058400.1.p | genome | JGI | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF260 | 92.9 | 3.8e-29 | 2 | 101 | 1 | 95 |
DUF260 1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqq 85
+C++C++lr++C++dC+l++++ p++q++++ +v+k+FG++ ++++++++p ++r+ +++sl++eA r+ +Pv+Gavg+++++++
Manes.07G058400.1.p 2 SCNGCRILRKGCSDDCMLRQCLqgiddPQAQANATVFVAKFFGRAGLISFISSVPVHQRPSLFQSLLFEAVGRTVNPVSGAVGLLWTGNW 91
6***************************************************************************************** PP
DUF260 86 qleqlkaela 95
+++q+++ ++
Manes.07G058400.1.p 92 HVCQTAVMTV 101
****987665 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 221 aa
Download sequence Send
to blast |
MSCNGCRILR KGCSDDCMLR QCLQGIDDPQ AQANATVFVA KFFGRAGLIS FISSVPVHQR 60
PSLFQSLLFE AVGRTVNPVS GAVGLLWTGN WHVCQTAVMT VLRGGAIEPM LDFDGRMLGQ 120
NLDNFSECSK FKPRNVSSGS KTTRTTTLKM KRSGDDDDES KCELTNLDLC LMYPTEKKLR 180
ATTPSEEESE TTTLVSGGST SAGTNCSLQG GERKLWPLFI *
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