PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.07G042200.1.p
Organism
Manihot esculenta
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family NAC
Protein Properties Length: 441aa    MW: 49405.7 Da    PI: 4.4847
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.07G042200.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM1362.5e-42291581128
                  NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvka.eekewyfFskrdkkyatgkrknr.atksgyWkat 86 
                          lp+G+rF P+d+el+ +yL +k+++++l+  + i+ vd+y++ P++L +  k++  +e++wyfF++r+kky++g+r++r a + gyWkat
  Manes.07G042200.1.p  29 LPVGYRFAPSDDELIRYYLLRKISNEPLPP-NRIHVVDLYNYSPQQLTEtyKLNReRESQWYFFTSREKKYPNGSRPKRnAGELGYWKAT 117
                          799************************999.77**************842333332556********************77889****** PP

                  NAM  87 gkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                          g+dk++l+ +++  g +k+L +y+gr+++g+kt+W mhey l
  Manes.07G042200.1.p 118 GTDKAILD-GKKPLGFRKSLDYYEGRQRDGTKTNWKMHEYLL 158
                          ********.999****************************76 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.44E-5024190IPR003441NAC domain
PROSITE profilePS5100548.8929191IPR003441NAC domain
PfamPF023654.7E-2230157IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 441 aa     Download sequence    Send to blast
MEQNQNKNKG VAADCSTSSD DVERYFNSLP VGYRFAPSDD ELIRYYLLRK ISNEPLPPNR  60
IHVVDLYNYS PQQLTETYKL NRERESQWYF FTSREKKYPN GSRPKRNAGE LGYWKATGTD  120
KAILDGKKPL GFRKSLDYYE GRQRDGTKTN WKMHEYLLHQ SLVPSGATAR GKNPLQPKQL  180
DEWVLCKIYN NNRAEDKKNK NDEDGGTVNI AETEIPKADD VSTAQPLLCD NSLMISQEYE  240
NGYGSYLLPP LWSDPPQPIL DNVDNDPLPM NNTFNNFAYN VQPIQICQPS SHYSSGFQPI  300
CGFGDQISDV SCVETSSMND HLLMPTGQEL IYGNGDQVWN INSIQTTTMN DHLYVPVEEP  360
VFGCGNQVSD INYMVTADMN GYLLVIAEEP SPLLEPAAAE KSTREFDAQP NSSNQPMSVE  420
GGAYDHASSA QGGGEAELPV *
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A7e-382819714174Stress-induced transcription factor NAC1
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.07G042200.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021618824.10.0protein BEARSKIN1-like
TrEMBLA0A2C9VIE70.0A0A2C9VIE7_MANES; Uncharacterized protein
STRINGcassava4.1_030551m1e-142(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF15078714
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G08790.12e-46NAC family protein