PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.06G163000.1.p
Organism
Manihot esculenta
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family NAC
Protein Properties Length: 421aa    MW: 47347.6 Da    PI: 6.7345
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.06G163000.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM1462.1e-45992242128
                  NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdk 90 
                          ppG+rF+P deel+v+yL +kv++++l+  + i evd+y+++P+dL  +  + +ekewyfF++rdkky++g+r++ra+++g+Wkatg dk
  Manes.06G163000.1.p  99 PPGYRFSPFDEELIVHYLDNKVANRPLPK-NKIMEVDLYSYNPEDLAvEYRHCGEKEWYFFTPRDKKYPNGSRPRRAARNGFWKATGADK 187
                          9*************************999.77**************9444455899********************************** PP

                  NAM  91 evlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                           +++ ++++vg +k Lvfy+ + ++++kt+W+mheyr+
  Manes.06G163000.1.p 188 CIKH-GNKVVGYRKALVFYTRTIHESKKTNWIMHEYRV 224
                          ***9.999************999*************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019416.41E-5396251IPR003441NAC domain
PROSITE profilePS5100552.54598251IPR003441NAC domain
PfamPF023652.2E-2599224IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 421 aa     Download sequence    Send to blast
MEGTNSEAKF SVTSIHQSVF KTHSNPQAFS AASPSSASTS SSSSFGHCNS RLPSQSLAYV  60
NSPADGITAS ASVDVSDRDL FKASNRSKAL DIPFLDSFPP GYRFSPFDEE LIVHYLDNKV  120
ANRPLPKNKI MEVDLYSYNP EDLAVEYRHC GEKEWYFFTP RDKKYPNGSR PRRAARNGFW  180
KATGADKCIK HGNKVVGYRK ALVFYTRTIH ESKKTNWIMH EYRVSNAPPR TKTSANDMRL  240
DDWVLCRIYK KEGKGNTKNR QSNEEQSPQQ LDAAAANVAM GVENESEAPG YTNTLGEYQQ  300
HVPMQMQEFP PSFSHVPPLD NNLAMNNYGG HNQAMFGALN YQQGSFVEPK YVSYGAYNIY  360
GADMAPPMLE PIQMVPANQN VFTSRYLNEN GCELKARSSE DQYECCYLNY EENADDAMGT  420
Q
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A9e-509725214169Stress-induced transcription factor NAC1
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.06G163000.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021616656.10.0NAC transcription factor 32-like
TrEMBLA0A2C9VTU50.0A0A2C9VTU5_MANES; Uncharacterized protein (Fragment)
STRINGcassava4.1_029733m0.0(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF101121642
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G77450.13e-60NAC domain containing protein 32