PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.06G140900.1.p
Organism
Manihot esculenta
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family Trihelix
Protein Properties Length: 972aa    MW: 108540 Da    PI: 6.8752
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.06G140900.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix29.12.6e-092282901982
             trihelix  19 erlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyf 82 
                           ++ rgk ++ + +ev+++++++g++r +k+   kw+n+ ++++k+ e+e++++ +++   +yf
  Manes.06G140900.1.p 228 VQSTRGKTRADKDREVADFLQRHGVNRDAKTAGTKWDNMLGEFRKVYEWERGGERDQV-GKSYF 290
                          5667889999999**************************************9955444.44555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF561127.72E-17805954IPR011009Protein kinase-like domain
CDDcd001802.86E-11820954No hitNo description
Gene3DG3DSA:1.10.510.109.7E-7822916No hitNo description
Gene3DG3DSA:1.10.510.103.8E-4923963No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 972 aa     Download sequence    Send to blast
MGENEGETAK KQTQQSQQQQ LSSSPKDPLE ETPETRPQHH QQPPSSLVVT AAPFISTLYV  60
PIGATSSAFD QQFETVTPKR PRYATAQWKI LPSPPQQQQQ TQTAMATIAT HESSPSPSAN  120
PTSTTNPHTQ QLHTTAASSS DTASSPPHSP LASLSAASGH ETTKTEGQQP HHQFRKGKYV  180
SPIWKPNEML WLARAWRVQY QGGYDASGSS SRTEHPDIGQ TTGGEVTVQS TRGKTRADKD  240
REVADFLQRH GVNRDAKTAG TKWDNMLGEF RKVYEWERGG ERDQVGKSYF RLSPHERKQY  300
RLPASFDEEV FEELSQYMGS RMRTSSRAAI GTADDGRSAL AGARSLPLPP LFKEDDYSVS  360
ARTKQVMPSG SEAYFQSSRG SLLGFESSMD VAAGAASSSK ELRRIGKIRM TWEESVNLWA  420
EEGEHRGRVR IQGSSFLNAD ELTFFDDSMV ACTMEIFEDG PLKGFSVDGF VPGQQVKVFG  480
RRKSSASASA IPAWDFQDPT EYYVGCLRVP PTALPNLFEL SWYLQEPPPE ELRFPLRKDV  540
YRDLPQGKEQ FFTTASELLD CRGIAFDILS SVIRTNPSIS GATAASRDSY IGIWDDCINR  600
VVSKFCSVEV VIVRKASSSS PSLVDTLQDQ WPNVTGFVRN FCLWRGEEAD QLREGQADPS  660
STIVEKLLWT YMDIPYILGY YAVGYSVTFC ALYRSQDRII RTDLCAVDLS SPVERLKALV  720
PCYRIAGLLP LLAERCFNNI NNGGTFKQLT FSDFERVDAG DGNIIEMTPN TVTRFFPSKR  780
KWAAVKEIYD YLDQRIPHAE FIFRSLEKDL ALVFKPRGVK FKPINCEQLV EALKYVTKAL  840
VALHDLSFMH RDLSWDKVMR RTDRENEWFV CGFDEAVGAP QLYPHGIVEA RGRHAPEMGR  900
GLHGVKVDVW GVGNLVKTCG LGPNTVPKML RELQNRCLDQ NPEQRPTAAD CYHHLLQVQS  960
SLQSSSSGGP Y*
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.06G140900.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021615472.10.0uncharacterized protein LOC110617164
TrEMBLA0A2C9VST10.0A0A2C9VST1_MANES; Uncharacterized protein
STRINGcassava4.1_024314m0.0(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF118572831
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33550.14e-08Trihelix family protein