PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Manes.06G140600.1.p

Organism

Manihot esculenta

Taxonomic ID

3983

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot

Family

bHLH

Protein Properties

Length: 161aa MW: 18123.1 Da PI: 8.0739

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Manes.06G140600.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	12.6	0.00025	3	38	18	55
HHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 18 safeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 + + Lr llP ++K ++ +Av+YI++Lq Manes.06G140600.1.p 3 TLYTSLRNLLPLeY---IKGKRAMSDHIHEAVKYINDLQ 38 67899*****77...999****************9 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50888	8.55	1	37	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamily	SSF47459	5.23E-6	3	52	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 161 aa Download sequence Send to blast
MTTLYTSLRN LLPLEYIKGK RAMSDHIHEA VKYINDLQKK IKELSFLRDE MKKLSKLRVL 60 EPEGDRLNGF APTSVMVRPC FVGVEVVINS GFGNQSLHLS RALELLLEEG LDVVNCISTK 120 VNQRVIHTIQ FEVSYMTCID MSELQNKLIR AIPSTGAENS *

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Manes.06G140600.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_021614638.1	1e-115	transcription factor bHLH118-like
TrEMBL	A0A2C9VQQ3	1e-114	A0A2C9VQQ3_MANES; Uncharacterized protein
STRING	cassava4.1_026244m	1e-115	(Manihot esculenta)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF792	33	125

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G51790.1	1e-32	bHLH family protein

Link Out ? help Back to Top
Phytozome	Manes.06G140600.1.p