 |
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Manes.06G126500.1.p |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
|
Family |
Trihelix |
Protein Properties |
Length: 301aa MW: 34480.7 Da PI: 7.6377 |
Description |
Trihelix family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Manes.06G126500.1.p | genome | JGI | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | trihelix | 75 | 1.2e-23 | 40 | 130 | 1 | 82 |
trihelix 1 rWtkqevlaLiearremeerlrrgk.........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpy 81
rW+k+e+ +Lie+++ +e+r+ rg+ l++p+W+++s++++++g++r+p+qC+++w+nl +++kkik +e++r + +++ +++
Manes.06G126500.1.p 40 RWSKEETFVLIEGKKVVENRVDRGRrstsalgsdLIQPKWDSISSYCKQHGVNREPVQCRKRWSNLLGDFKKIKIWESQRINADETFWKM 129
8*********************986667777777*********************************************98888766655 PP
trihelix 82 f 82
Manes.06G126500.1.p 130 R 130
4 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 301 aa
Download sequence Send
to blast |
MAPDSIDAQH FSTLPEPDKI RKQRALNVTG NGFKAPRHPR WSKEETFVLI EGKKVVENRV 60 DRGRRSTSAL GSDLIQPKWD SISSYCKQHG VNREPVQCRK RWSNLLGDFK KIKIWESQRI 120 NADETFWKMR NEHRRERELP SFFDREVYDI LNGGLFATEA IPLTFVAVKT EKNTDADEVA 180 AAVAEEQEQE EVEAVFASGQ HASADCTNKQ KNPGSTTWMA STSQKEWKRR RLSSNGFEDN 240 DPADQLIKIL ERNSNMLSVE LEAQNIRYEL DRSQRKEHND SLLGVLHKLT DALVRMADKL 300 *
|