PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.06G103800.1.p
Organism
Manihot esculenta
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family bHLH
Protein Properties Length: 188aa    MW: 21066.3 Da    PI: 9.8131
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.06G103800.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.81.2e-101463654
                         HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
                  HLH  6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54
                         + +Er+RR +++   ++L +l+P+ ++k +++ ls  + L +A  YIk+L
  Manes.06G103800.1.p 14 KTVERNRRIHMKGLCFKLASLIPShRFKHSKELLSQQDQLDHAAAYIKHL 63
                         679*********************888666666****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000833.13E-5667No hitNo description
PROSITE profilePS5088810.048863IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474593.79E-10982IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.105.4E-101379IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003539.2E-41469IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.3E-71563IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 188 aa     Download sequence    Send to blast
MKKGNSESPK LDRKTVERNR RIHMKGLCFK LASLIPSHRF KHSKELLSQQ DQLDHAAAYI  60
KHLTERIDEL KKIKEQAMRS LGANNNPMDA TMMGLRLPVI KLRDMGSSIE VAVISGLNKN  120
FTLYEVITIL EEEGAEVVSA SFSTVGDKVF HSIHAQVKFS RVGVDTSRAC HRLQELICWN  180
AELSGSH*
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.06G103800.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021616693.11e-138transcription factor bHLH162-like
TrEMBLA0A2C9VR571e-136A0A2C9VR57_MANES; Uncharacterized protein
STRINGcassava4.1_024041m1e-137(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF68492141
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.11e-24bHLH family protein