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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Manes.06G091600.2.p |
| Organism |
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| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
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| Family |
Dof |
| Protein Properties |
Length: 332aa MW: 36434.1 Da PI: 8.6993 |
| Description |
Dof family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Manes.06G091600.2.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-Dof | 104.7 | 5.4e-33 | 1 | 49 | 14 | 62 |
zf-Dof 14 tntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
++tkfCy+nny+++qPr+fCkaC+ryWt+GG++rnvPvG+grrknk+s
Manes.06G091600.2.p 1 MDTKFCYFNNYNVNQPRHFCKACQRYWTAGGTMRNVPVGAGRRKNKNSA 49
69********************************************976 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 332 aa
Download sequence Send
to blast |
MDTKFCYFNN YNVNQPRHFC KACQRYWTAG GTMRNVPVGA GRRKNKNSAS HYRHMTISEV 60
LQAARIEAPN GTHNPALKTN GRVLSFGLDA PICDSMVSVL NLADKRVLNG FHNLEEQRIP 120
VPFKGRENGD DCSSGSSVTV SNSMEEGGAT CSREPLMQSI NGFASPLPCL PGVPWNSALL 180
PPPFCPPGFP MSFYPHFWNC GIWNTPLLSP QSSSSSSNQR APSGNNSTLG KHSRDRYTLK 240
LDDFEKEEQP TKLKNGCILV PKILRIDDPT EAARSSIWAT LGIKNESFTG EGLFKAFQPK 300
TDERKHVAET SPILLANPAA ASRSINFNEN S*
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| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor that binds specifically to a 5'-AA[AG]G-3' consensus core sequence (By similarity). Regulates a photoperiodic flowering response. Transcriptional repressor of 'CONSTANS' expression. {ECO:0000250, ECO:0000269|PubMed:19619493}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Circadian-regulation. Highly expressed at the beginning of the light period, then decreases, reaching a minimum between 16 and 29 hours after dawn before rising again at the end of the day. {ECO:0000269|PubMed:19619493}. |
| Publications
? help Back to Top |
- Duarte JM, et al.
Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
Mol. Biol. Evol., 2006. 23(2): p. 469-78
[PMID:16280546] - Ding Y, et al.
Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
BMC Plant Biol., 2013. 13: p. 229
[PMID:24377444] - Corrales AR, et al.
Multifaceted role of cycling DOF factor 3 (CDF3) in the regulation of flowering time and abiotic stress responses in Arabidopsis.
Plant Cell Environ., 2017. 40(5): p. 748-764
[PMID:28044345] - Renau-Morata B, et al.
Ectopic Expression of CDF3 Genes in Tomato Enhances Biomass Production and Yield under Salinity Stress Conditions.
Front Plant Sci, 2017. 8: p. 660
[PMID:28515731] - Henriques R, et al.
The antiphasic regulatory module comprising CDF5 and its antisense RNA FLORE links the circadian clock to photoperiodic flowering.
New Phytol., 2017. 216(3): p. 854-867
[PMID:28758689]
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