PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.06G018700.3.p
Organism
Manihot esculenta
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family bHLH
Protein Properties Length: 164aa    MW: 18508.4 Da    PI: 4.6957
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.06G018700.3.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH11.80.000442173954
                         TCHHHHHHHHHHHHHH CS
                  HLH 39 sKaeiLekAveYIksL 54
                         +Ka+i + A++YI++L
  Manes.06G018700.3.p  2 DKASIIKDAIDYIQEL 17
                         8*************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:4.10.280.101.5E-6133IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS508888.626117IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474594.32E-5134IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF550211.09E-785152No hitNo description
Gene3DG3DSA:3.30.70.2607.7E-588149No hitNo description
PROSITE profilePS516719.54589162IPR002912ACT domain
CDDcd048732.27E-490151No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0008152Biological Processmetabolic process
GO:0016597Molecular Functionamino acid binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 164 aa     Download sequence    Send to blast
MDKASIIKDA IDYIQELHEQ EKIIQAEIRE LESGNLKKGP GYEFEEDLPV FLGSKKKKID  60
QFYYSCGSRA YPIEDLELSV AYMGDKILRV SLTCSKRTDT MVKLCEAFES LQLNIISADI  120
TTVSGRLLMT VFIKANEEES DYLKKKIETA IGALHDPQSL MIM*
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.06G018700.3.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021615071.11e-116transcription factor bHLH35-like isoform X1
RefseqXP_021615073.11e-116transcription factor bHLH35-like isoform X3
SwissprotQ2HIV98e-44BH035_ARATH; Transcription factor bHLH35
TrEMBLA0A2C9VM131e-115A0A2C9VM13_MANES; Uncharacterized protein
TrEMBLA0A2C9VNG71e-115A0A2C9VNG7_MANES; Uncharacterized protein
STRINGcassava4.1_015642m1e-115(Manihot esculenta)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57150.14e-46bHLH family protein