PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.05G175600.1.p
Organism
Manihot esculenta
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family bHLH
Protein Properties Length: 249aa    MW: 27551.5 Da    PI: 7.6668
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.05G175600.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH38.71.8e-123884555
                         HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                  HLH  5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                         h   Er RR+++++ f++L  llP++      K +K++i  +Av+YIk Lq
  Manes.05G175600.1.p 38 HILTERERRKKMRNMFSNLHALLPEL----PAKADKSSIIDEAVKYIKILQ 84
                         7889*********************6....39****************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.2153383IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.0E-153796IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474596.28E-1637100IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000106.6E-103884IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.26E-133888No hitNo description
SMARTSM003533.3E-103989IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd048733.29E-4171228No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 249 aa     Download sequence    Send to blast
MEITAVAQVG QKRNRKGVAK NGETVKSGSA AESEHDVHIL TERERRKKMR NMFSNLHALL  60
PELPAKADKS SIIDEAVKYI KILQETLQTL EKQKEEKLHG ATIDESEPSV ITSHKEVFES  120
REAFLAIQGP SKGSSMATNM PHSCPVSLSP SCFRTWFSPN VVMNISGNDA QISVCSLRRP  180
GFLTSIIYIL EKHKLDVVSA HISSDQFRSI YMIHVHAGWG SGQYPEALSV EDTFKLAAGE  240
MNLWLLSC*
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.05G175600.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021612172.10.0transcription factor bHLH95-like
TrEMBLA0A2C9VZF80.0A0A2C9VZF8_MANES; Uncharacterized protein
STRINGcassava4.1_030210m0.0(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF47733358
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49770.13e-44bHLH family protein