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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Manes.05G106400.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
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Family | ERF | ||||||||
Protein Properties | Length: 369aa MW: 41238.7 Da PI: 4.488 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 62.1 | 1.3e-19 | 43 | 92 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +y GVr+++ +grWvAeI+d + ++ r++lg+++taeeAa+a+++a+ l+g Manes.05G106400.1.p 43 RYVGVRQRP-SGRWVAEIKDtV----QKIRVWLGTYDTAEEAARAYDEAACLLRG 92 79*******.7*********55....35**********************99998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00018 | 5.53E-31 | 42 | 99 | No hit | No description |
Gene3D | G3DSA:3.30.730.10 | 1.1E-27 | 43 | 99 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 3.3E-14 | 43 | 92 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 19.941 | 43 | 100 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 1.57E-19 | 43 | 100 | IPR016177 | DNA-binding domain |
SMART | SM00380 | 4.2E-34 | 43 | 106 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 3.4E-8 | 44 | 55 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 3.4E-8 | 66 | 82 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 369 aa Download sequence Send to blast |
MTKKRKASHL HKGEAHAEKE DVAWDQVMEA AAALGGAWRA RKRYVGVRQR PSGRWVAEIK 60 DTVQKIRVWL GTYDTAEEAA RAYDEAACLL RGANTRTNFW PCSSSHYKPA LPSKITNRLL 120 KRLRERNNSL STSLPVSLQE QEASKVEETQ FDNFFDQLPA EDCGICEDNN SDTSGGDYMS 180 GFFETNFSRT EVCDWSNADE EAVKEKGEQE EEINEPWVVD FPLEDVAGGS SSTNCSPFDI 240 TQEMMAMGPM EQQEYYYGDD QSMLKNIMKR LNYERKFSAS LYAYNGVSEC LSLTFGSAAN 300 SDELPSKLRI INSNNKNEKD GKEEVQEFGI ISAAQTATEE MGSRSSAMEG GESSLWSSLD 360 LPPICFIV* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Manes.05G106400.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_021611473.1 | 0.0 | uncharacterized protein LOC110614279 | ||||
TrEMBL | A0A2C9VV16 | 0.0 | A0A2C9VV16_MANES; Uncharacterized protein | ||||
STRING | cassava4.1_024647m | 0.0 | (Manihot esculenta) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF3338 | 32 | 67 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G19790.1 | 2e-18 | related to AP2 11 |
Link Out ? help Back to Top | |
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Phytozome | Manes.05G106400.1.p |