PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.05G083900.1.p
Organism
Manihot esculenta
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family bZIP
Protein Properties Length: 452aa    MW: 48991.5 Da    PI: 6.3842
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.05G083900.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_150.15.8e-16228283459
                          XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevakl 59 
                           kr+rr+q+NRe+ArrsR+RK+a++ eLe+ v  L  e+++L  +l  ++k+++  
  Manes.05G083900.1.p 228 EKRARRMQSNRESARRSRRRKQAQLNELETQVGHLRDERTSLLTRLTDINKKCDDA 283
                          69**************************************************9865 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.1E-11224281No hitNo description
SMARTSM003387.3E-18225289IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.519227279IPR004827Basic-leucine zipper domain
PfamPF001708.0E-13229281IPR004827Basic-leucine zipper domain
SuperFamilySSF579595.06E-10229278No hitNo description
PROSITE patternPS000360232247IPR004827Basic-leucine zipper domain
PfamPF124981.6E-31296424IPR020983Basic leucine-zipper, C-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 452 aa     Download sequence    Send to blast
MNSIFSVDDF SDLLWPPMPA HPPVMSRSPS EWELEKFLEE FPVPTSSSTS DSIPSAVSES  60
PTLSRPRNGE DDVVEIEKPE IHPSPPPVPL PPRNRLHQPS DRASLAPADS EDYRAFLKSQ  120
LDLACAAAAK ARESNVKPEG ITSLAEEQSV ATKNLQPGSQ VSGDSNGISK AQGEADGGSL  180
RLPALPSTQR KQEVPARQTT SGSSREDSDD DDLDGDTETN EHMDPADEKR ARRMQSNRES  240
ARRSRRRKQA QLNELETQVG HLRDERTSLL TRLTDINKKC DDAAVDNRIL NANIETLRTK  300
VKMAEDQVKR VTGLNPMLLA RSSMPSMGMQ FVTGQTDAPA SVAVPMQQNN HFFHHSVPNI  360
PSGAPHLQGL NNSCPNKNLT SHATIPQGDN GTSNIGGRTP MQPLTATAQA MADAPPMQHV  420
QKQTVPSVGP AALPRCNNGL SHPVAKDNKK K*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1241248RRSRRRKQ
2243248SRRRKQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.05G083900.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021613749.10.0light-inducible protein CPRF2 isoform X1
TrEMBLA0A2C9VVX50.0A0A2C9VVX5_MANES; Uncharacterized protein
STRINGcassava4.1_007487m0.0(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF136911825
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54620.18e-44basic leucine zipper 25